DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15803 and frm-5.2

DIOPT Version :9

Sequence 1:NP_001287388.1 Gene:CG15803 / 42206 FlyBaseID:FBgn0038606 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_001360605.1 Gene:frm-5.2 / 176821 WormBaseID:WBGene00021406 Length:1386 Species:Caenorhabditis elegans


Alignment Length:491 Identity:100/491 - (20%)
Similarity:170/491 - (34%) Gaps:161/491 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 QVEVIDLINDGNGLGFILVGGRST---GVVIKALTPGGVAERDGRLQLGDHLLQIGEVNLRGFSS 70
            |.:::.:.:..||||..||.|...   ||.:|.:...|...:.| :.:||.::|:|..::.|...
 Worm   947 QFDILLVKDPANGLGLTLVDGNLNGVPGVYVKLVADNGAGMKAG-VCVGDRIVQVGTESMEGHDR 1010

  Fly    71 EQVATVLRQTGAQVRLIVARPVEPTAIDYQTLACQAPIIPTKLLSDPEELSRHLFQNPSFATAAV 135
            .....::|:.|.:|.:::||      :|             .|:...:::|..:.          
 Worm  1011 LHAVELVRRCGQRVPMVIAR------LD-------------GLIRHQKDVSAEML---------- 1046

  Fly   136 AAAAAAAAAAGSGSDGDVGGGGVLDVASLVGLVRGGPAEGTELSAVEPQPSAAVLQLQQLSELAG 200
              |:|....:.:.|.||               :...|......|...|.|..|..:.|:.....|
 Worm  1047 --ASAGRKKSFTSSSGD---------------LLNAPNRTNGQSRTPPAPRKAANRRQRAVSDFG 1094

  Fly   201 DLADFPLPPIPG---------GGGHSMVTDSNAGQRPCPRLDL------DIVPFSI---LSPPPR 247
            .:.| .||.:.|         .|.|...:|...|:...|...:      |.:..||   ..|.|.
 Worm  1095 AIGD-ALPTLDGDNLINIKAISGLHLDESDEEKGEYRLPTTSMYAFDRDDDLQASIKESKKPAPE 1158

  Fly   248 PALQMLPLETQWRCVQDQNRHI------ETV--------IADSKR----KLLANEDG--GSASAS 292
            |....|   .::|..:..|..|      |.|        |.:.||    :|..||:|  |...||
 Worm  1159 PKSGEL---RKYRYARRSNLEIAEEIEEEAVESSDDDGQIDEGKRVIDVELDRNENGSLGVQIAS 1220

  Fly   293 GSG---------------------------------------------------------SPDSY 300
            .||                                                         .|.:|
 Worm  1221 LSGRVCIKQLTSEPAISHPDIRVGDVLLYVNGIAVEGKVHQEVVAMLRGGGDRVVLGVQRPPPAY 1285

  Fly   301 MDSPETET--------YVVELHKNVYGLGITVAGYVCEEEDLSGIFVKSIIEGSAAETSGQIQIN 357
            .|.....:        .|:.|.|.:..||:::|.....:    |||:::|.:.|||.:.|.:::.
 Worm  1286 SDQHHASSTSASAPLISVMLLKKPMATLGLSLAKRTMSD----GIFIRNIAQDSAASSEGTLRVG 1346

  Fly   358 DRIVAVDGRSLSGVTNHQAVELLRNTDIVVHLTLER 393
            ||:|::||..:.|.|....:|.|:.....|.:|:.|
 Worm  1347 DRLVSLDGEPVDGFTPATILEKLKLVQGPVQITVTR 1382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15803NP_001287388.1 PDZ_signaling 17..89 CDD:238492 20/74 (27%)
PDZ 307..393 CDD:214570 25/93 (27%)
PDZ_signaling 605..680 CDD:238492
PDZ 773..858 CDD:214570
frm-5.2NP_001360605.1 B41 510..712 CDD:214604
PH-like 708..837 CDD:388408
PDZ_signaling 948..1029 CDD:238492 20/81 (25%)
PDZ_signaling 1201..1279 CDD:238492 9/77 (12%)
PDZ_signaling 1300..1380 CDD:238492 24/83 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19964
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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