Sequence 1: | NP_001287388.1 | Gene: | CG15803 / 42206 | FlyBaseID: | FBgn0038606 | Length: | 880 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_016872564.1 | Gene: | USH1C / 10083 | HGNCID: | 12597 | Length: | 956 | Species: | Homo sapiens |
Alignment Length: | 397 | Identity: | 70/397 - (17%) |
---|---|---|---|
Similarity: | 113/397 - (28%) | Gaps: | 209/397 - (52%) |
- Green bases have known domain annotations that are detailed below.
Fly 307 ETYVVELHKNVYGLGITVAG---YVCEEEDLSGIFVKSIIEGSAAETSGQIQINDRIVAVDGRSL 368
Fly 369 SGVTNHQAVELLRNTDIVVHLTLERFLRGRKYEHLQVALTEIKGTSAPSGLDRSQDKDQDQESQL 433
Fly 434 SMPGSPSIATLSWLPPKSLDADSIATEGDEAVDAEYVGISGAEDEFIELPSRDTVESNMSHVLDR 498
Fly 499 SDHSGGLTKDQVPRISPIVPLTNGRSLILADDSGNDTDEQCAEPETETAQARKGSKPETERVKDL 563
Fly 564 GDTKTDTDPDPDLDPGQMPTPTNEAPVKAASPTAASLRVAWKSLGISLEGTVDVECGIEKRPHHY 628
Fly 629 IRSILADGPVGRQGI---------------LRPGDELLQVNEHKLQGLRHIEVVKILKELPA-RV 677
Fly 678 KLVCARG 684 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG15803 | NP_001287388.1 | PDZ_signaling | 17..89 | CDD:238492 | |
PDZ | 307..393 | CDD:214570 | 26/88 (30%) | ||
PDZ_signaling | 605..680 | CDD:238492 | 22/90 (24%) | ||
PDZ | 773..858 | CDD:214570 | |||
USH1C | XP_016872564.1 | None | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3528 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |