DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15803 and lnx1

DIOPT Version :9

Sequence 1:NP_001287388.1 Gene:CG15803 / 42206 FlyBaseID:FBgn0038606 Length:880 Species:Drosophila melanogaster
Sequence 2:XP_017950997.2 Gene:lnx1 / 100487348 XenbaseID:XB-GENE-952178 Length:742 Species:Xenopus tropicalis


Alignment Length:704 Identity:138/704 - (19%)
Similarity:216/704 - (30%) Gaps:313/704 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LGFILVGGRS---TGVVIKALTPGGVAERDGRLQLGDHLLQIGEVNLRGFSSEQVATVLRQTGAQ 83
            ||..:|||..   |.::|:.:...||..|||||..||.:|::..:::.........:||||....
 Frog   296 LGIRIVGGNETPLTQIIIQHIYQDGVIGRDGRLLPGDMILKVNGIDISSVPHTYALSVLRQPSKV 360

  Fly    84 VRLIVARPVEPTAIDYQTLACQAPIIPTKLLSDPEELSRHLFQNPSFATAAVAAAAAAAAAAGSG 148
            :||.|.|.        |...|:...:..:..| |::.|.|:..|.                    
 Frog   361 LRLTVLRE--------QRYKCRTNGVNMEQHS-PQDDSIHVVLNK-------------------- 396

  Fly   149 SDGDVGGG----------GVLDVASLVGLVRGGPA---------------EGTELSAVEPQPSAA 188
            |..||..|          |:.    :..|:.||.|               .|.:|....|:.:| 
 Frog   397 SSHDVQLGIKLVRRRDEPGIY----IFNLLEGGVAARDGYLQENDRVLSINGHDLRNGTPEIAA- 456

  Fly   189 VLQLQQLSELAGDLADFPLPPIPGGGGHSMVTDSNAGQRPCPRLDLDIVPFSILSPPPRPALQML 253
              ||.|.||               .|.:.:|:..:..|.|      ||:.               
 Frog   457 --QLIQASE---------------EGVYFIVSRHSRHQTP------DILQ--------------- 483

  Fly   254 PLETQWR--------CVQDQNRHIETVIADSKRKLLANEDGGSASASGSGSPDSYMDSPETETYV 310
              |.:|.        |..::|...:    ::.|.:|.:|.                        |
 Frog   484 --EARWHNNNDSPATCTNERNYFNK----NASRTVLCHEK------------------------V 518

  Fly   311 VELHK-NVYGLGITVAGYVCE-EEDLSGIFVKSIIEGSAAETSGQIQINDRIVAVDGRSLSGVTN 373
            |.:.| |...||:||||.... |.||. |||.|:.........|:::..|.::.|:|.:|:||:.
 Frog   519 VSITKDNTESLGMTVAGGASNWEWDLP-IFVTSVDADGVIGRDGRLKTGDILLNVNGINLTGVSR 582

  Fly   374 HQAVELLRNTDIVVHLTLERFLRGRKYEHLQVALTEIKGTSAPSGLDRSQDKDQDQESQLSMPGS 438
            .:||.||:|:                                                      |
 Frog   583 SEAVSLLKNS------------------------------------------------------S 593

  Fly   439 PSIATLSWLPPKSLDADSIATEGDEAVDAEYVGISGAEDEFIELPSRDTVE--------SNMSHV 495
            .|...|     |:|:......|.|...:|.|:       ::::..|....|        .|:.|.
 Frog   594 SSSVVL-----KALEIKEYEPEEDNLNNALYM-------DYLQNGSEQNREWSPVWVMWLNLPHY 646

  Fly   496 LDRSDHSGGLTKDQVPRISPIVPLTNGRSLILADDSGNDTDEQCAEPETETAQARKGSKPETERV 560
                                   |.:.|.::|..::..                           
 Frog   647 -----------------------LYSCREVVLRRNTAG--------------------------- 661

  Fly   561 KDLGDTKTDTDPDPDLDPGQMPTPTNEAPVKAASPTAASLRVAWKSLGISLEGTVDVECGIEKRP 625
                                                         |||.|:.|..| :|...|  
 Frog   662 ---------------------------------------------SLGFSIVGGSD-DCSRIK-- 678

  Fly   626 HHYIRSILADGPVGRQGILRPGDELLQVNEHKLQGLRHIEVVKILKELPARVKL 679
            ..:|:|||...|....|.||.||.||:||.....|:.:..:|::|||:..||.|
 Frog   679 PFFIKSILEGTPAHHDGRLRCGDILLEVNGRCTSGMPYNSLVRMLKEIRGRVVL 732

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15803NP_001287388.1 PDZ_signaling 17..89 CDD:238492 23/69 (33%)
PDZ 307..393 CDD:214570 29/87 (33%)
PDZ_signaling 605..680 CDD:238492 30/75 (40%)
PDZ 773..858 CDD:214570
lnx1XP_017950997.2 mRING-HC-C3HC3D_LNX1 43..84 CDD:319693
PDZ_signaling 282..366 CDD:238492 23/69 (33%)
PDZ_signaling 390..470 CDD:238492 21/121 (17%)
PDZ_signaling 516..>585 CDD:238492 25/93 (27%)
PDZ_signaling 651..735 CDD:238492 32/157 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 133 1.000 Inparanoid score I4477
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19964
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.150

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