DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15803 and tamalin

DIOPT Version :9

Sequence 1:NP_001287388.1 Gene:CG15803 / 42206 FlyBaseID:FBgn0038606 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_001120354.1 Gene:tamalin / 100145424 XenbaseID:XB-GENE-943584 Length:352 Species:Xenopus tropicalis


Alignment Length:341 Identity:68/341 - (19%)
Similarity:117/341 - (34%) Gaps:106/341 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 LQMLPLETQWRCVQDQNRHIETVIADSKR----------------KLLANEDGGSASASGSGSPD 298
            |:.|..:.::.|..|:     ||..|..:                |.|| ..||:...:..||..
 Frog     6 LRKLQHKEEYACPPDR-----TVYRDRDKLDPYSALTSYKQADMYKALA-VSGGTLPRTKKGSTA 64

  Fly   299 SYMDSPETETY---VVELHK-NVYGLGITVAGYVCEEEDLSGI----FVKSIIEGSAAETSGQIQ 355
            .:.:..::..|   ::.|.| :....|..:..|....:|.:.:    ||..:.:||.|:..| ::
 Frog    65 GWKNVSQSSEYQRKILTLQKEDSESFGFEIQTYGLHHQDKNAVEMFTFVCRVQDGSPAQLCG-LK 128

  Fly   356 INDRIVAVDGRSLSGVTNHQAVELLRNTDIVVHL----------------------TL------- 391
            :.|.|..|:|.::.||.:...|||::.:...:.|                      ||       
 Frog   129 VGDIIAGVNGLNMDGVRHRDIVELIKVSGNTIRLETVYGSAIRRAELEARIQYLKQTLYEKWEEY 193

  Fly   392 -------ERFLRG------RKYEHLQVALTEIKGTSAPSGLDRSQDKDQDQESQLSMPGSPSIAT 443
                   :|.|.|      ..|:.|:...:.|.||......|               |.:.::|.
 Frog   194 RSLMVQEQRLLHGIVVKDPSVYDTLESVRSYIYGTVNTCSKD---------------PLTGTLAA 243

  Fly   444 LSWLPPKSLDADSIATEGDEAVDAEYVGISGAEDEFIELPSRDTVESNMSHVLDRSDHSGGLTKD 508
            .|..  .|....|...|.::||.......|.:.||...||.             :|:::|...|.
 Frog   244 GSMC--SSASCLSTTEENEDAVYQTCYFSSDSTDEINSLPG-------------KSNNNGKPYKS 293

  Fly   509 QVPRISPIV---PLTN 521
            .:.|.|.:.   |.||
 Frog   294 TLTRSSSVKCPGPATN 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15803NP_001287388.1 PDZ_signaling 17..89 CDD:238492
PDZ 307..393 CDD:214570 24/129 (19%)
PDZ_signaling 605..680 CDD:238492
PDZ 773..858 CDD:214570
tamalinNP_001120354.1 PDZ_signaling 78..163 CDD:238492 20/85 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.