DRSC/TRiP Functional Genomics Resources

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Protein Alignment naz and PBR1

DIOPT Version :9

Sequence 1:NP_001287387.1 Gene:naz / 42204 FlyBaseID:FBgn0286852 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_014218.2 Gene:PBR1 / 855540 SGDID:S000005125 Length:407 Species:Saccharomyces cerevisiae


Alignment Length:408 Identity:98/408 - (24%)
Similarity:156/408 - (38%) Gaps:108/408 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 DNQIKEQIVVVTGGNS-GIGFEIAQALAGRGGRIILACRNL-----EAGKRAAAIIKRELGCRTP 102
            :.::..::.:|||..| |:|..:|..:|..|.::|:..|.:     |..:......|.||     
Yeast    48 ERKLHGKVYLVTGATSQGMGTSVAYKMAELGAQLIILTREVDEWVTEWCEELREKTKNEL----- 107

  Fly   103 LNSLDEDDNPEDRYFVEARYLDLCSLRSVHHFAGQLM--AEFERIDVLVNNAGVVFANTQM---- 161
                         .|||.  .||.:|..:..||...:  :...|:|      ||:..:..|    
Yeast   108 -------------IFVEK--CDLSNLWEIRKFATSWLDNSPPRRLD------GVIVMSGDMEPWG 151

  Fly   162 ----------PTEDGFERHSQVNYLAPFLLTHLLLPHLQR---SEQGRILFVSAHAHQGAKIDFD 213
                      .::||.|.....||:|.|.|.:||.|..:.   ....||:..:........|:.:
Yeast   152 IPKISLPQRRSSKDGLELQIATNYVAIFHLLNLLQPSFKAQPPDRDVRIILATCWLQVVGDINIE 216

  Fly   214 DPLNVGTW-SVKF-HAREAFAHSKLCVLLATRWMAREL--------------KGTSVTVNCCTPG 262
            |||    | :.|: .|.:.||.|||.:.|:...:.|.|              .|.:||:....||
Yeast   217 DPL----WQNAKYKSALKFFASSKLQLGLSMMELQRRLTEDIKNQKTNGAERTGKNVTITMVQPG 277

  Fly   263 LVRGT---RHFRNSP---LMSSLCVKAVTYPWMWLFMKNAYEGAQCAIRLATDPQLKEVT----- 316
            .:|..   |...|..   |:...|:  :.||.:|||.|:...|.|..:.....|:|:||.     
Yeast   278 TMRSNSLRRVISNGSVVLLIILYCI--LLYPILWLFTKSGRRGDQSFLYALMTPELEEVNLKDTK 340

  Fly   317 GEYFNDCEIAA-SSVTGQDKELAKKLYMQTIKTLESVTKLTVDREEYGLDLQLEMESELRLEEPA 380
            .:|.:||.|.. :.....|:||.|||:..|.:.:                ||||       ::.|
Yeast   341 VKYISDCSIVKFARKEFDDEELQKKLFDNTERDI----------------LQLE-------KKVA 382

  Fly   381 EAEPETETNQAADEKKWQ 398
            ......:|.....:||.|
Yeast   383 AKRNANKTGNQNSKKKSQ 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nazNP_001287387.1 FabG 47..318 CDD:223959 78/322 (24%)
retinol-DH_like_SDR_c_like 50..342 CDD:212492 87/344 (25%)
PBR1NP_014218.2 retinol-DH_like_SDR_c_like 53..367 CDD:212492 87/345 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24320
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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