DRSC/TRiP Functional Genomics Resources

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Protein Alignment naz and SDR1

DIOPT Version :10

Sequence 1:NP_732328.1 Gene:naz / 42204 FlyBaseID:FBgn0286852 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_001326283.1 Gene:SDR1 / 825294 AraportID:AT3G61220 Length:327 Species:Arabidopsis thaliana


Alignment Length:320 Identity:80/320 - (25%)
Similarity:128/320 - (40%) Gaps:81/320 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 VVTGGNSGIGFEIAQALAGRGGRIILACRNLEAGKRAAAIIKRELGCRTPLNSLDEDDNPEDRYF 117
            ||||.|.||||||.:.||..|.|::|..|:...|..|...:|:||           :.:.:...|
plant    41 VVTGANRGIGFEICRQLASEGIRVVLTSRDENRGLEAVETLKKEL-----------EISDQSLLF 94

  Fly   118 VEARYLDLCSLRSVHHFAGQLMAEFERIDVLVNNAGVVFANTQMPT------EDGF--------- 167
            .:....|..|:.|:..|   :..:|.::|:||||||:....|....      ::||         
plant    95 HQLDVADPASITSLAEF---VKTQFGKLDILVNNAGIGGIITDAEALRAGAGKEGFKWDEIITET 156

  Fly   168 ----ERHSQVNYLAPFLLTHLLLPHLQRSEQGRILFVSAH-------AHQGAKIDFDDPLNV--- 218
                |...::||..|..:....:|.|:.|:..||:.||:.       .::.||....|..|:   
plant   157 YELTEECIKINYYGPKRMCEAFIPLLKLSDSPRIVNVSSSMGQLKNVLNEWAKGILSDAENLTEE 221

  Fly   219 ---------------GTWSVKFHAR--EAFAHSKLCVLLATRWMARELKGTSVTVNCCTPGLVRG 266
                           ||...|..|:  .|:..||..:...||.:|:  |.....||...||.|:.
plant   222 RIDQVINQLLNDFKEGTVKEKNWAKFMSAYVVSKASLNGYTRVLAK--KHPEFRVNAVCPGFVKT 284

  Fly   267 TRHFRNSPLMSSLCVKAVTYPWMWLFMKNAYEGAQCAIRLATDPQLKEVTGEYFNDCEIA 326
            ..:|:...|                   :..|||...:|||..|..:..:|.:|:..:::
plant   285 DMNFKTGVL-------------------SVEEGASSPVRLALLPHQETPSGCFFSRKQVS 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nazNP_732328.1 retinol-DH_like_SDR_c_like 50..342 CDD:212492 80/320 (25%)
SDR1NP_001326283.1 carb_red_PTCR-like_SDR_c 38..327 CDD:187585 80/320 (25%)

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