DRSC/TRiP Functional Genomics Resources

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Protein Alignment naz and rdh10a

DIOPT Version :10

Sequence 1:NP_732328.1 Gene:naz / 42204 FlyBaseID:FBgn0286852 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_001074052.2 Gene:rdh10a / 562840 ZFINID:ZDB-GENE-070112-2242 Length:339 Species:Danio rerio


Alignment Length:303 Identity:73/303 - (24%)
Similarity:115/303 - (37%) Gaps:59/303 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 PNDNQIKEQIVVVTGGNSGIGFEIAQALAGRGGRIILACRNLEAGKRAAAIIKRELGCRTPLNSL 106
            |.:..:..|:.|:||...|:|...|:..|.|...::|...|..:.:..|.::::         ..
Zfish    29 PKEKSVAGQVCVITGAGGGLGRLFAKEFARRRATLVLWDINSHSNEETAEMVRQ---------IY 84

  Fly   107 DEDDNPEDRY-----------FVEARY---LDLCSLRSVHHFAGQLMAEFERIDVLVNNAGVVFA 157
            .|.|||..:.           |....|   ||:....||:..|.::..|...:|:|:||||||..
Zfish    85 REQDNPMSKEGAVGGVEEVPPFQPQVYTYVLDVGKRESVYSTAEKVRKEVGEVDLLINNAGVVSG 149

  Fly   158 NTQMPTEDG-FERHSQVNYLAPFLLTHLLLPHLQRSEQGRILFVSAHAHQGAKIDFDDPLNVGTW 221
            :..:...|. .||...||..|.|..|...||.:.....|.|:.|::.....:....:|.......
Zfish   150 HHLLECPDELIERTMVVNCHAHFWTTKAFLPKMLEMNHGHIVTVASSLGLFSTAGVEDYCASKFG 214

  Fly   222 SVKFHAREAFAHSKLCVLLATRWMARELKGTSVTVNC---CTPGLVRGTRHFRN-----SPLMSS 278
            ::.||  |:.:|         ...|.|..|..:|:.|   ...|:.||.|..:.     .||...
Zfish   215 AIGFH--ESLSH---------EIQASEKDGIKMTLVCPYLVDTGMFRGCRIRKEIEPFLPPLRPE 268

  Fly   279 LCVK-----------AVTYP---WMWLFMKN--AYEGAQCAIR 305
            .|||           .:..|   :|..|||:  .:|...|..|
Zfish   269 FCVKQAMRAILTDQPMICTPRIVYMVNFMKSILPFEAIVCMYR 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nazNP_732328.1 retinol-DH_like_SDR_c_like 50..342 CDD:212492 72/295 (24%)
rdh10aNP_001074052.2 17beta-HSDXI-like_SDR_c 38..305 CDD:187598 68/286 (24%)

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