DRSC/TRiP Functional Genomics Resources

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Protein Alignment naz and Sdr16c6

DIOPT Version :10

Sequence 1:NP_732328.1 Gene:naz / 42204 FlyBaseID:FBgn0286852 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_001102826.1 Gene:Sdr16c6 / 502939 RGDID:1562060 Length:316 Species:Rattus norvegicus


Alignment Length:313 Identity:72/313 - (23%)
Similarity:125/313 - (39%) Gaps:51/313 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 IKEQIVVVTGGNSGIGFEIAQALAGRGGRIILACRNLEAGKRAAAIIKRELGCRTPLNSLDEDDN 111
            :..:||::||..||:|..:|...|..|..::|...|.|.......::|::...:......|    
  Rat    34 VSGEIVLITGAGSGLGRLLAMHFANHGATLVLWDINQEGNMETYKLVKQKGDVKVFAYKCD---- 94

  Fly   112 PEDRYFVEARYLDLCSLRS-VHHFAGQLMAEFERIDVLVNNAGVVFANTQMPTEDGF-ERHSQVN 174
                          ||.|: |:..|.|:..|...:.:|:||||:|...:.:.|.|.. |:...||
  Rat    95 --------------CSNRTEVYRVADQVREEVGDVTILINNAGIVTGKSFLDTPDHLVEKSFLVN 145

  Fly   175 YLAPFLLTHLLLPHLQRSEQGRILFVSAHAH----QGAKIDFDDPLNVGTWSVKFHAREAFAHSK 235
            .::.|.:....||.:..:..|.::.:|:.|.    .|.. |:.        |.||   .||..::
  Rat   146 AISHFWICKTFLPAMINANHGHLVCISSIAGVVGINGLS-DYS--------SSKF---AAFGLAE 198

  Fly   236 LCVLLATRWMARELKGTSVTVNCCTPGLVRG--TRHFRNSPLMSSLCV-----KAVTYPWMWLFM 293
            ...|..|......:|.|.|.......|:..|  |::....||:....|     .|:....::|.:
  Rat   199 SLFLELTMVRKTNIKSTIVCPYFIKTGMFEGCKTKYPLLLPLLEQEFVAQKIFHAILEDQVYLLI 263

  Fly   294 -KNAYEGAQCAIRLATDPQLKEVTGEYFNDCEIAASSVTGQDKELAKKLYMQT 345
             |.||  ....::....|::....|||.. .:...:|.||:    |:...:||
  Rat   264 PKFAY--FTLFLKQLISPKMMIALGEYLG-VDTCMTSFTGR----AEAELLQT 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nazNP_732328.1 retinol-DH_like_SDR_c_like 50..342 CDD:212492 70/305 (23%)
Sdr16c6NP_001102826.1 17beta-HSDXI-like_SDR_c 38..274 CDD:187598 62/267 (23%)

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