DRSC/TRiP Functional Genomics Resources

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Protein Alignment naz and rdh14a

DIOPT Version :9

Sequence 1:NP_001287387.1 Gene:naz / 42204 FlyBaseID:FBgn0286852 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_001006031.1 Gene:rdh14a / 450010 ZFINID:ZDB-GENE-041010-124 Length:286 Species:Danio rerio


Alignment Length:301 Identity:115/301 - (38%)
Similarity:164/301 - (54%) Gaps:32/301 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 IKEQIVVVTGGNSGIGFEIAQALAGRGGRIILACRNLEAGKRAAAIIKRELGCRTPLNSLDEDDN 111
            ::.:.|:|||.|||||......|..|..|:|:|||:.|..::||..||:|.|             
Zfish     2 LRGKTVIVTGANSGIGKATTTELLRRQARVIMACRDRERAEKAAQEIKQEAG------------- 53

  Fly   112 PEDRYFVEARYLDLCSLRSVHHFAGQLMAEFERIDVLVNNAGVVFANTQMP---TEDGFERHSQV 173
            ||....| .:.|||.||:||..|...::.|..|||:|:||||:.    |.|   :|||||....|
Zfish    54 PEQGELV-IKLLDLASLKSVRVFCEGIIKEEPRIDILINNAGIY----QCPYTKSEDGFEMQFAV 113

  Fly   174 NYLAPFLLTHLLLPHLQRSEQGRILFVSAHAHQGAKIDFDDPLNVGTWSVKFHAREAFAHSKLCV 238
            |:|..||||:|||..|:.|...||:.||:..::..:|:|||..:..::...|    ::|.|||..
Zfish   114 NHLGHFLLTNLLLDLLKCSAPSRIIVVSSKLYKYGEINFDDLNSEQSYDKAF----SYARSKLAN 174

  Fly   239 LLATRWMARELKGTSVTVNCCTPGLVRGT--RHFRNSPLMSSLCVKAVTYPWMWLFMKNAYEGAQ 301
            ||.|..::.:||.|.||||..|||:||..  ||. :.||:    ||.:.......|.|:..||||
Zfish   175 LLFTLELSHKLKETGVTVNALTPGIVRTNLGRHV-HIPLL----VKPLFNLASRAFFKSPEEGAQ 234

  Fly   302 CAIRLATDPQLKEVTGEYFNDCEIAASSVTGQDKELAKKLY 342
            .::.||....::.|.|:.|.||:.........|:|:||||:
Zfish   235 TSVYLACSEDVEGVQGKCFADCKEEQLLAKATDEEVAKKLW 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nazNP_001287387.1 FabG 47..318 CDD:223959 105/275 (38%)
retinol-DH_like_SDR_c_like 50..342 CDD:212492 114/296 (39%)
rdh14aNP_001006031.1 PRK06197 4..285 CDD:235737 115/299 (38%)
NADB_Rossmann 4..278 CDD:304358 115/299 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D414554at33208
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24320
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X72
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.930

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