DRSC/TRiP Functional Genomics Resources

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Protein Alignment naz and cbr1

DIOPT Version :9

Sequence 1:NP_001287387.1 Gene:naz / 42204 FlyBaseID:FBgn0286852 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_919387.1 Gene:cbr1 / 373866 ZFINID:ZDB-GENE-030902-2 Length:276 Species:Danio rerio


Alignment Length:311 Identity:78/311 - (25%)
Similarity:122/311 - (39%) Gaps:77/311 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 QIVVVTGGNSGIGFEIAQALAGR-GGRIILACRNLEAGKRAAAIIKRELGCRTPLNSLDEDDNPE 113
            ::.:|||.|.||||.|.:||... .|.:.|:.|::..|..|...:|:| |.....:.||.:| |.
Zfish     5 KVALVTGANKGIGFAIVRALCKEYTGDVYLSSRDVGRGTAAVDSLKKE-GLHPLFHQLDIND-PN 67

  Fly   114 DRYFVEARYLDLCSLRSVHHFAGQLMAEFERIDVLVNNAGVVFANTQMPTEDGFERHSQV----N 174
                         |:|:...|   ...::..:|||:||||:.|   :|.....|...:.|    |
Zfish    68 -------------SVRTARDF---FQEKYGGLDVLINNAGIAF---KMADTTPFGTQADVTLKTN 113

  Fly   175 YLAPFLLTHLLLPHLQRSEQGRILFVSA----------HAHQGAKIDFDD----PLN-------- 217
            :.|...:.::.||.::..  ||::.||:          .....|:...||    .||        
Zfish   114 FFATRDMCNVFLPIIKPG--GRLVNVSSGMGSMALGRCSPELQARFRSDDITEEELNGLMERFVR 176

  Fly   218 ---VGTWSVKFHAREAFAHSKLCVLLATRWMAREL----KGTSVTVNCCTPGLVRGTRHFRNSPL 275
               .|..|.:.....|:..||..:...||..||.|    .|..:..|.|.||.||......|:  
Zfish   177 EAQEGVHSERGWPSTAYGISKTGLTTLTRIQARNLTKERPGDGILCNACCPGWVRTDMAGPNA-- 239

  Fly   276 MSSLCVKAVTYPWMWLFMKNAYEGAQCAIRLATDPQ-LKEVTGEYFNDCEI 325
                             .|:..|||...:.||..|. .||..|::.::.::
Zfish   240 -----------------TKSPDEGAITPVYLALLPAGAKEPHGQFVSEMKV 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nazNP_001287387.1 FabG 47..318 CDD:223959 77/302 (25%)
retinol-DH_like_SDR_c_like 50..342 CDD:212492 78/311 (25%)
cbr1NP_919387.1 carb_red_PTCR-like_SDR_c 5..276 CDD:187585 78/311 (25%)
adh_short 5..237 CDD:278532 67/254 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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