DRSC/TRiP Functional Genomics Resources

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Protein Alignment naz and cbr1

DIOPT Version :10

Sequence 1:NP_732328.1 Gene:naz / 42204 FlyBaseID:FBgn0286852 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_919387.1 Gene:cbr1 / 373866 ZFINID:ZDB-GENE-030902-2 Length:276 Species:Danio rerio


Alignment Length:311 Identity:78/311 - (25%)
Similarity:122/311 - (39%) Gaps:77/311 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 QIVVVTGGNSGIGFEIAQALAGR-GGRIILACRNLEAGKRAAAIIKRELGCRTPLNSLDEDDNPE 113
            ::.:|||.|.||||.|.:||... .|.:.|:.|::..|..|...:|:| |.....:.||.:| |.
Zfish     5 KVALVTGANKGIGFAIVRALCKEYTGDVYLSSRDVGRGTAAVDSLKKE-GLHPLFHQLDIND-PN 67

  Fly   114 DRYFVEARYLDLCSLRSVHHFAGQLMAEFERIDVLVNNAGVVFANTQMPTEDGFERHSQV----N 174
                         |:|:...|   ...::..:|||:||||:.|   :|.....|...:.|    |
Zfish    68 -------------SVRTARDF---FQEKYGGLDVLINNAGIAF---KMADTTPFGTQADVTLKTN 113

  Fly   175 YLAPFLLTHLLLPHLQRSEQGRILFVSA----------HAHQGAKIDFDD----PLN-------- 217
            :.|...:.::.||.::..  ||::.||:          .....|:...||    .||        
Zfish   114 FFATRDMCNVFLPIIKPG--GRLVNVSSGMGSMALGRCSPELQARFRSDDITEEELNGLMERFVR 176

  Fly   218 ---VGTWSVKFHAREAFAHSKLCVLLATRWMAREL----KGTSVTVNCCTPGLVRGTRHFRNSPL 275
               .|..|.:.....|:..||..:...||..||.|    .|..:..|.|.||.||......|:  
Zfish   177 EAQEGVHSERGWPSTAYGISKTGLTTLTRIQARNLTKERPGDGILCNACCPGWVRTDMAGPNA-- 239

  Fly   276 MSSLCVKAVTYPWMWLFMKNAYEGAQCAIRLATDPQ-LKEVTGEYFNDCEI 325
                             .|:..|||...:.||..|. .||..|::.::.::
Zfish   240 -----------------TKSPDEGAITPVYLALLPAGAKEPHGQFVSEMKV 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nazNP_732328.1 retinol-DH_like_SDR_c_like 50..342 CDD:212492 78/311 (25%)
cbr1NP_919387.1 carb_red_PTCR-like_SDR_c 5..276 CDD:187585 78/311 (25%)

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