DRSC/TRiP Functional Genomics Resources

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Protein Alignment naz and Rdh13

DIOPT Version :9

Sequence 1:NP_001287387.1 Gene:naz / 42204 FlyBaseID:FBgn0286852 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_001101938.1 Gene:Rdh13 / 361504 RGDID:1304959 Length:334 Species:Rattus norvegicus


Alignment Length:330 Identity:125/330 - (37%)
Similarity:189/330 - (57%) Gaps:29/330 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 TIAALTVGIVITVRTLMSGQRCPNDNQIKEQIVVVTGGNSGIGFEIAQALAGRGGRIILACRNLE 84
            ::....:|..:.::..::|..||:...|..:.|:|||.|:|||.:.|..||.|||.||||||:.|
  Rat     9 SVVGTVIGGTVLLKDYVAGGACPSKATIPGRTVIVTGANTGIGKQTALELAKRGGNIILACRDRE 73

  Fly    85 AGKRAAAIIKRELGCRTPLNSLDEDDNPEDRYFVEARYLDLCSLRSVHHFAGQLMAEFERIDVLV 149
            ..:.||..|:            .|..||.    |.|.:|||.||:|:..|||:::.|.||:|:||
  Rat    74 KCEAAAKDIR------------GETLNPR----VRAEHLDLASLKSIREFAGKIIKEEERVDILV 122

  Fly   150 NNAGVVFANTQMP---TEDGFERHSQVNYLAPFLLTHLLLPHLQRSEQGRILFVSAHAHQGAKID 211
            |||.|:    :.|   ||||||....||:|..||||:|||..|:.|...||:.:|:.||....||
  Rat   123 NNAAVM----RCPHWTTEDGFEMQFGVNHLGHFLLTNLLLDKLKASAPSRIINLSSLAHVAGHID 183

  Fly   212 FDDPLNVGTWSV-KFHAREAFAHSKLCVLLATRWMARELKGTSVTVNCCTPGLVRGTRHFRNSPL 275
            |:| ||   |.: |:..:.|:..|||.|:|.|:.::|.|:||.||||...||:.| |...|::.:
  Rat   184 FED-LN---WQIKKYDTKAAYCQSKLAVVLFTKELSRRLQGTGVTVNALHPGVAR-TELGRHTGM 243

  Fly   276 MSSLCVKAVTYPWMWLFMKNAYEGAQCAIRLATDPQLKEVTGEYFNDCEIAASSVTGQDKELAKK 340
            .:|.....:..|:.||..|:....||.:..||...:|:.|:|:||:.....|.|...:|:|:|::
  Rat   244 HNSAFSGFMLGPFFWLLFKSPQLAAQPSTYLAVAEELESVSGKYFDGLREKAPSPEAEDEEVARR 308

  Fly   341 LYMQT 345
            |:.::
  Rat   309 LWTES 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nazNP_001287387.1 FabG 47..318 CDD:223959 112/274 (41%)
retinol-DH_like_SDR_c_like 50..342 CDD:212492 119/295 (40%)
Rdh13NP_001101938.1 NADB_Rossmann 38..313 CDD:419666 120/299 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D414554at33208
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X72
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.830

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