DRSC/TRiP Functional Genomics Resources

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Protein Alignment naz and Rdh1

DIOPT Version :10

Sequence 1:NP_732328.1 Gene:naz / 42204 FlyBaseID:FBgn0286852 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_610310.2 Gene:Rdh1 / 35708 FlyBaseID:FBgn0033205 Length:330 Species:Drosophila melanogaster


Alignment Length:332 Identity:119/332 - (35%)
Similarity:175/332 - (52%) Gaps:29/332 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 WPTIAALTVGIVITVRTLMSGQRCPNDNQIKEQIVVVTGGNSGIGFEIAQALAGRGGRIILACRN 82
            ||  |.:.|||.. ::..|.|.:...|.....::.:|||.|:|||.|.|..:|.|||.:.||||:
  Fly    15 WP--ATIGVGIYF-LKEYMQGGKFTKDTDETGKVFIVTGANTGIGKETALEIARRGGTVYLACRD 76

  Fly    83 LEAGKRAAA-IIKRELGCRTPLNSLDEDDNPEDRYFVEARYLDLCSLRSVHHFAGQLMAEFERID 146
            :...::|.. |||             |.:|..    :.:|.|||.||.|:..|......|..::.
  Fly    77 MNRCEKARKDIIK-------------ETNNQN----IFSRELDLSSLDSIRKFVDGFKKEQPKLH 124

  Fly   147 VLVNNAGVVFANTQMPTEDGFERHSQVNYLAPFLLTHLLLPHLQRSEQGRILFVSAHAHQGAKID 211
            ||:|||||:.....: |:||:|....||::..||||:|||..|:.|...||:.||:.||....|:
  Fly   125 VLINNAGVMRCPKTL-TKDGYELQLGVNHIGHFLLTNLLLDVLKNSAPSRIVVVSSLAHARGSIN 188

  Fly   212 FDDPLNVGTWSVK-FHAREAFAHSKLCVLLATRWMARELKGTSVTVNCCTPGLVRGTRHFRNSPL 275
            ..| ||    |.| :....|::.|||..:|.||.:|:.|:|:.||||...||:| .|...||...
  Fly   189 VAD-LN----SEKSYDEGLAYSQSKLANVLFTRELAKRLEGSGVTVNALHPGVV-DTELARNWAF 247

  Fly   276 MSSLCVKAVTYPWMWLFMKNAYEGAQCAIRLATDPQLKEVTGEYFNDCEIAASSVTGQDKELAKK 340
            ..:..||....|.:|..:|....|||.:|..|.||:||.::|.||:||:....:....|.::||.
  Fly   248 FQTNLVKFFLKPMIWPLLKTPKSGAQTSIYAALDPELKNISGLYFSDCKPKPVASGALDDKVAKF 312

  Fly   341 LYMQTIK 347
            |:.::.|
  Fly   313 LWAESEK 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nazNP_732328.1 retinol-DH_like_SDR_c_like 50..342 CDD:212492 108/293 (37%)
Rdh1NP_610310.2 Rossmann-fold NAD(P)(+)-binding proteins 43..317 CDD:473865 109/297 (37%)

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