DRSC/TRiP Functional Genomics Resources

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Protein Alignment naz and Rdh10

DIOPT Version :10

Sequence 1:NP_732328.1 Gene:naz / 42204 FlyBaseID:FBgn0286852 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_852143.1 Gene:Rdh10 / 353252 RGDID:727793 Length:341 Species:Rattus norvegicus


Alignment Length:342 Identity:82/342 - (23%)
Similarity:130/342 - (38%) Gaps:65/342 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 TIAALTVGIVITVRTLMSGQRCPNDNQIKEQIVVVTGGNSGIGFEIAQALAGRGGRIILACRNLE 84
            |...|...::...|.|:.    |.:..:..|:.::||..||:|...|...|.|...::|...|.:
  Rat    11 TFKVLWAFVLAAARWLVR----PKEKSVAGQVCLITGAGSGLGRLFALEFARRRALLVLWDINTQ 71

  Fly    85 AGKRAAAIIK---REL----GCRTPLNSLDEDDNPEDRYFVEARYLDLCSLRSVHHFAGQLMAEF 142
            :.:..|.:::   |:|    .......:.:|:..|.....|.....|:....:|:..|.::..|.
  Rat    72 SNEETAGMVRHIYRDLEAADAAALQAGNGEEEILPPCNLQVFTYTCDVGKRENVYLTAERVRKEV 136

  Fly   143 ERIDVLVNNAGVVFANTQMPTEDG-FERHSQVNYLAPFLLTHLLLPHLQRSEQGRILFVSAHAHQ 206
            ..:.|||||||||..:..:...|. .||...||..|.|..|...||.:.....|.|:.|::    
  Rat   137 GEVSVLVNNAGVVSGHHLLECPDELIERTMMVNCHAHFWTTKAFLPTMLEINHGHIVTVAS---- 197

  Fly   207 GAKIDFDDPLNVGTWSVKFHAREAFAHSKLCVLLATRWMARELK-----GTSVTVNC---CTPGL 263
                      ::|.:|..  ..|.:..||..|:.....::.|||     |...|:.|   ...|:
  Rat   198 ----------SLGLFSTA--GVEDYCASKFGVVGFHESLSHELKAAEKDGIKTTLVCPYLVDTGM 250

  Fly   264 VRGTRHFRN-----SPLMSSLCVKAV------------TYPWMWL--FMKN--AYEGAQCAIR-L 306
            .||.|..:.     .||....|||..            |...|::  |||:  .:|...|..| |
  Rat   251 FRGCRIRKEIEPFLPPLKPDYCVKQAMKAILTDQPMICTPRLMYIVTFMKSILPFEAVVCMYRFL 315

  Fly   307 ATD-------PQLKEVT 316
            ..|       .|.|:.|
  Rat   316 GADKCMYPFIAQRKQAT 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nazNP_732328.1 retinol-DH_like_SDR_c_like 50..342 CDD:212492 77/312 (25%)
Rdh10NP_852143.1 17beta-HSDXI-like_SDR_c 38..307 CDD:187598 68/284 (24%)

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