DRSC/TRiP Functional Genomics Resources

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Protein Alignment naz and Ldsdh1

DIOPT Version :10

Sequence 1:NP_732328.1 Gene:naz / 42204 FlyBaseID:FBgn0286852 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_572436.1 Gene:Ldsdh1 / 31726 FlyBaseID:FBgn0029994 Length:320 Species:Drosophila melanogaster


Alignment Length:195 Identity:44/195 - (22%)
Similarity:79/195 - (40%) Gaps:41/195 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 WWPTIAALTVGIVITVRTLMSGQRCPNDNQIKEQIVVVTGGNSGIGFEIAQALAGRGGRIILACR 81
            :|..||...||:.          |.|..:.:..::|::||...|:|.|:|               
  Fly    36 FWLAIAEAIVGLF----------RAPPLDDVNGKVVLITGTGHGMGKEMA--------------- 75

  Fly    82 NLEAGKRAAAIIKRELGCRTPLNSLDEDDNPEDRYFVEARYLDLCSLRSVHHFAGQLMAEFERID 146
             |:..|..|.|:..::..:|...::.|..|...:.|  ....::.....:...|.::..|...|.
  Fly    76 -LQYAKLGATILCWDVNEQTNNQTVKEIKNNGGKAF--GYVCNVTKREELIELAQKVRKEHGFIH 137

  Fly   147 VLVNNAGVVFANTQMP-------TEDGFERHSQVNYLAPFLLTHLLLPHLQRSEQGRILFVSAHA 204
            |:|||||:      ||       ||:......::|.|:.|.:....||.:....:|.|:.:|:.|
  Fly   138 VVVNNAGI------MPCHPLLEHTENEIRLMYEINVLSHFWIIQAFLPDMIERNEGSIVALSSCA 196

  Fly   205  204
              Fly   197  196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nazNP_732328.1 retinol-DH_like_SDR_c_like 50..342 CDD:212492 37/162 (23%)
Ldsdh1NP_572436.1 Rossmann-fold NAD(P)(+)-binding proteins 60..287 CDD:473865 37/161 (23%)

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