DRSC/TRiP Functional Genomics Resources

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Protein Alignment naz and pbr1

DIOPT Version :10

Sequence 1:NP_732328.1 Gene:naz / 42204 FlyBaseID:FBgn0286852 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_593786.2 Gene:pbr1 / 2542391 PomBaseID:SPAC19A8.06 Length:376 Species:Schizosaccharomyces pombe


Alignment Length:393 Identity:92/393 - (23%)
Similarity:155/393 - (39%) Gaps:101/393 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 TWWP--TIAALTVGIVITVRTLMSGQRCPNDNQIKEQIVVVTGGNSGIGFEIAQALAGRGGRIIL 78
            |.|.  |.||:.|..:...:...||:....:.::...:|:||||:||||..:.:.||..|.::::
pombe    19 THWAQYTKAAIAVSTIAAFKFWTSGRTTTWERKMNGMVVMVTGGSSGIGQVVVEKLASLGAQVVI 83

  Fly    79 ACRNLEAGKRAAAIIKRELGCRTPLNSLDEDDNPEDRYFVEAR--------YLDLC---SLRSVH 132
            ..|.                         |.|.....|.::.|        |.::|   |:.||.
pombe    84 LLRT-------------------------EPDQFTVDYIMDLRKRTKNQLIYTEVCDLSSMLSVR 123

  Fly   133 HFAGQLM--AEFERIDVLVNNAGVV---FANTQMPTEDGFERHSQVNYLAPFLLTHLLLPHLQRS 192
            .||.:.:  ....|:|::|..:||:   |.:.| .||:|.|.....|:|.|:.|..:|.|.:...
pombe   124 KFATKWIDCTPIRRLDMIVLCSGVLLPPFMDRQ-TTEEGVELQWATNFLGPYQLLRILRPVIYGQ 187

  Fly   193 ---EQGRILFVSAHAHQGAKIDFDDPLNVGT--------WSVKFHA------------REAFAHS 234
               .:.||:..:..::....|||:| |::..        |.|..:|            ::|.||.
pombe   188 PGHREVRIVAATCSSYILGNIDFND-LDLSNHPYPRKSPWKVVGNAKLALMTYLYDFQKKAEAHE 251

  Fly   235 K-------LCVLLATRWMARELKGTSVTVNCCTPGLVR--GTRHFRNSPLMSSLCVKAVTYPWMW 290
            :       |..::|                  .||:||  |.|...:...:..|.:..:.:|:.|
pombe   252 RPDKMPCNLHTIMA------------------NPGVVRTPGFRRVVSFGKVWGLFLYLLLWPFWW 298

  Fly   291 LFMKNAYEGAQCAIRLATDPQLKEVTGEYF-NDCEIAASS---VTGQDKELAKKLYMQTIKTLES 351
            |.:|....|||........|:...:|.... |:|.|...|   :|  |.|.|:||.......::.
pombe   299 LLLKGTIHGAQSFFHAICSPEFASITQPVLVNECSIVEYSRKEIT--DPEFAEKLIKAADAQIDE 361

  Fly   352 VTK 354
            |.|
pombe   362 VEK 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nazNP_732328.1 retinol-DH_like_SDR_c_like 50..342 CDD:212492 81/343 (24%)
pbr1NP_593786.2 retinol-DH_like_SDR_c_like 54..351 CDD:212492 80/343 (23%)

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