DRSC/TRiP Functional Genomics Resources

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Protein Alignment naz and RDH12

DIOPT Version :10

Sequence 1:NP_732328.1 Gene:naz / 42204 FlyBaseID:FBgn0286852 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_689656.2 Gene:RDH12 / 145226 HGNCID:19977 Length:316 Species:Homo sapiens


Alignment Length:318 Identity:113/318 - (35%)
Similarity:173/318 - (54%) Gaps:40/318 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 TVRTLMSGQRCPNDNQIKEQIVVVTGGNSGIGFEIAQALAGRGGRIILACRNLEAGKRAAAIIKR 95
            ::|...:|..|..:.|:..::||:||.|:|||.|.|:.||.||.|:.:|||::..|:.||:.|: 
Human    21 SIRKFFAGGVCRTNVQLPGKVVVITGANTGIGKETARELASRGARVYIACRDVLKGESAASEIR- 84

  Fly    96 ELGCRTPLNSLDEDDNPEDRYFVEARYLDLCSLRSVHHFAGQLMAEFERIDVLVNNAGVVFANTQ 160
                      :|..::.     |..|.|||...:|:..||...:||.:::.:|:|||||:.. ..
Human    85 ----------VDTKNSQ-----VLVRKLDLSDTKSIRAFAEGFLAEEKQLHILINNAGVMMC-PY 133

  Fly   161 MPTEDGFERHSQVNYLAPFLLTHLLLPHLQRSEQGRILFVSAHAHQGAKIDFDDPLNVGTWSVKF 225
            ..|.||||.|..||:|..||||:|||..|:.|...|::.||:.||...||.|.|..:...:|..|
Human   134 SKTADGFETHLGVNHLGHFLLTYLLLERLKVSAPARVVNVSSVAHHIGKIPFHDLQSEKRYSRGF 198

  Fly   226 HAREAFAHSKLCVLLATRWMARELKGTSVTVNCCTPGLVRG--TRHFRNSPLMSSLCVKAVTYPW 288
                |:.||||..:|.||.:|:.|:||.||.....||:||.  .||      .|.||:       
Human   199 ----AYCHSKLANVLFTRELAKRLQGTGVTTYAVHPGVVRSELVRH------SSLLCL------- 246

  Fly   289 MWL----FMKNAYEGAQCAIRLATDPQLKEVTGEYFNDCEIAASSVTGQDKELAKKLY 342
            :|.    |:|.|.||||.::..|....|:.::|:||:||:....|...::.:.|::|:
Human   247 LWRLFSPFVKTAREGAQTSLHCALAEGLEPLSGKYFSDCKRTWVSPRARNNKTAERLW 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nazNP_732328.1 retinol-DH_like_SDR_c_like 50..342 CDD:212492 108/297 (36%)
RDH12NP_689656.2 retinol-DH_like_SDR_c 39..307 CDD:212495 109/300 (36%)

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