DRSC/TRiP Functional Genomics Resources

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Protein Alignment naz and Rdh13

DIOPT Version :10

Sequence 1:NP_732328.1 Gene:naz / 42204 FlyBaseID:FBgn0286852 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_780581.1 Gene:Rdh13 / 108841 MGIID:1918732 Length:334 Species:Mus musculus


Alignment Length:332 Identity:122/332 - (36%)
Similarity:188/332 - (56%) Gaps:29/332 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 TIAALTVGIVITVRTLMSGQRCPNDNQIKEQIVVVTGGNSGIGFEIAQALAGRGGRIILACRNLE 84
            ::....:|..:.::..::|..||:...|..:.|:|||.|:|||.:.|..||.|||.:|||||::|
Mouse     9 SVVGTVIGGTVLLKDYVAGGACPSKATIPGKTVIVTGANTGIGKQTALELAKRGGNVILACRDME 73

  Fly    85 AGKRAAAIIKRELGCRTPLNSLDEDDNPEDRYFVEARYLDLCSLRSVHHFAGQLMAEFERIDVLV 149
            ..:.||..|:            .|..||.    |.|..|||.||:|:..||.:::.|.||:|:||
Mouse    74 KCEVAAKDIR------------GETLNPR----VRAERLDLASLKSIREFARKVIKEEERVDILV 122

  Fly   150 NNAGVVFANTQMP---TEDGFERHSQVNYLAPFLLTHLLLPHLQRSEQGRILFVSAHAHQGAKID 211
            |||.|:    :.|   ||||||....||||..||||:|||..|:.|...||:.:|:.||....||
Mouse   123 NNAAVM----RCPHWTTEDGFEMQFGVNYLGHFLLTNLLLDKLKASAPSRIINLSSLAHVAGHID 183

  Fly   212 FDDPLNVGTWSV-KFHAREAFAHSKLCVLLATRWMARELKGTSVTVNCCTPGLVRGTRHFRNSPL 275
            |:| ||   |.: |:..:.|:..|||.|:|.|:.::..|:|:.||||...||:.| |...|::.:
Mouse   184 FED-LN---WQMKKYDTKAAYCQSKLAVVLFTKELSHRLQGSGVTVNALHPGVAR-TELGRHTGM 243

  Fly   276 MSSLCVKAVTYPWMWLFMKNAYEGAQCAIRLATDPQLKEVTGEYFNDCEIAASSVTGQDKELAKK 340
            .:|.....:..|:.||..|:....||.:..||...:|:.|:|:||:.....|.|...:|:|:|::
Mouse   244 HNSAFSGFMLGPFFWLLFKSPQLAAQPSTYLAVAEELENVSGKYFDGLREKAPSPEAEDEEVARR 308

  Fly   341 LYMQTIK 347
            |:.::.:
Mouse   309 LWTESAR 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nazNP_732328.1 retinol-DH_like_SDR_c_like 50..342 CDD:212492 116/295 (39%)
Rdh13NP_780581.1 Rossmann-fold NAD(P)(+)-binding proteins 38..313 CDD:473865 117/299 (39%)

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