DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PKD and CLA4

DIOPT Version :9

Sequence 1:NP_001262705.1 Gene:PKD / 42203 FlyBaseID:FBgn0038603 Length:906 Species:Drosophila melanogaster
Sequence 2:NP_014101.1 Gene:CLA4 / 855418 SGDID:S000005242 Length:842 Species:Saccharomyces cerevisiae


Alignment Length:848 Identity:178/848 - (20%)
Similarity:315/848 - (37%) Gaps:237/848 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 APRSPSGSSQ-----------QSLVSTEDSTG------------------RNDSSSSLNIPGRHQ 205
            |||.||.:||           ..|:|..|.|.                  ::|...|.....|:.
Yeast    21 APRPPSSNSQGRTCYNQTQPITKLMSQLDLTSASHLGTSTSKKKSGWVSYKDDGILSFIWQKRYL 85

  Fly   206 RTHSS-------GSRNGLMVLRIPHTFMVHTYGIPTVCQLCKKLLKGLFKQGLQCRD-------- 255
            ..|.|       ..:|...:|:||.|.:: :.....:.|.|.:|::        |.|        
Yeast    86 MLHDSYVALYKNDKQNDDAILKIPLTSII-SVSRTQLKQYCFELVR--------CSDRNSVSSGS 141

  Fly   256 -------CQYNTHKK--CMDKVPHDCTG--EAQLSQLQIQAGAKERDNFFRE---EFDDSDGD-- 304
                   ...|:.|.  ...|...|...  :|..::..:.:|.....||..:   .||...|.  
Yeast   142 SSSLNVSSDSNSKKSIYIATKTESDLHSWLDAIFAKCPLLSGVSSPTNFTHKVHVGFDPETGSFV 206

  Fly   305 ---------------DGSEYGKYKSAMSSGVNLV-----AGRPR---EAPKA--LTNAHNSPPEL 344
                           .|.::....:|:...:...     ||.|.   :.|::  .:::..|.|..
Yeast   207 GMPTNWEKLLKHSRITGEDWNNNSAAVIQVLQFYQEYNGAGNPTNTLDKPQSGETSSSQKSLPNS 271

  Fly   345 VNGGLVDDSSVSGGETSKSSSDGQSEQ-SQSSTSSSPS-----------------------ANIP 385
            .|...:.::||:    |||||...|.. ||..||..|:                       :|||
Yeast   272 YNDNKLRNNSVN----SKSSSGVSSSMVSQRKTSQPPNTKSPVSLGSGSLPPINTKLPTSQSNIP 332

  Fly   386 LMRIVQSV---KHTKKRGGQALKEGWL----VHYTSLDKAVKRYYWRLDSKTITLFVSEQGSKYH 443
              |.:|:|   ::.|.|.|.:...|..    :|..:..:::::...:...:.    ...|...||
Yeast   333 --RHLQNVPNQQYPKMRNGHSPTNGQFPRGPMHPNNSQRSLQQQQQQQQQQK----QQHQQYPYH 391

  Fly   444 KELPLAELLSIESHLGDPRPECN----YCFELRLPNLS----------YFVGQDPQVGAKEEQAV 494
            .:.|........|.|...||..|    |..:.:.|..|          |.....|.....:.|..
Yeast   392 HQGPSPSPSPSPSPLNPYRPHHNMINPYSKQPQSPLSSQSTQNQAIPRYAQNSSPTAAHFQPQRT 456

  Fly   495 RLPPPDSG-------------------IGSDIAKSWETSIRQAFMH------------------- 521
            ...||.|.                   :.....:|...::|||...                   
Yeast   457 APKPPISAPRAPYPSNQNATSNTHVQPVAPKNDQSTPQTMRQAPKRPDADVAQPGGVAKPKKPAR 521

  Fly   522 --VTNTQCCESEEQV---QDMGQLYQIFPDEVLGSGQFGVVY--GGVHKKTQR------------ 567
              ::..:.....::|   .|..|.:::.  |..|.|..|.||  ...|..|:.            
Yeast   522 PTMSTAEIMSKLKKVTVNADPSQCFKVI--EKAGQGASGSVYLAERTHIPTESNMIELINNDIDE 584

  Fly   568 -----EVAIKVIDKLRFPTKQEAQLKNEVAILQNISHCGVVN-LERMFETPERIFVVMEKLKGDM 626
                 :||||.:...:.|.|:  .:.||:.::::..|..:|| ||....|.:.::||||.::|..
Yeast   585 PHVGDKVAIKQMVLSKQPRKE--LIVNEILVMKDSRHKNIVNFLEAYLRTDDDLWVVMEFMEGGS 647

  Fly   627 LEMIL------SHARGRLSERVTKFLITQILIALKYLHSQNIVHCDLKPENVLLSSDAEFPQVKL 685
            |..|:      .::...|:|....:::.:....||:||.::|:|.|:|.:||||.:.|   :||:
Yeast   648 LTDIIENSPTNDNSHSPLTEPQIAYIVRETCQGLKFLHDKHIIHRDIKSDNVLLDTRA---RVKI 709

  Fly   686 CDFGY-ARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEEEDI 749
            .|||: ||:..::|.|.::||||.::||||::.:.|:..:|:||:|::....|.|..|:     :
Yeast   710 TDFGFCARLTDKRSKRATMVGTPYWMAPEVVKQREYDEKIDVWSLGIMTIEMLEGEPPY-----L 769

  Fly   750 NDQIQNAAFMYPPN---PWKEISSNAIDL---INNLLQVKQRKRYTVDKSLLHYWLQDKQTYRDL 808
            |:....|.::...|   ..|...|.::::   ::..|.|..|.|.:.::.|.|.:.......:||
Yeast   770 NEDPLKALYLIATNGTPKLKHPESLSLEIKRFLSVCLCVDVRYRASTEELLHHGFFNMACDPKDL 834

  Fly   809 RNL 811
            .:|
Yeast   835 TSL 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PKDNP_001262705.1 C1_1 109..154 CDD:278556
C1 223..272 CDD:197519 9/65 (14%)
PH_PKD 396..522 CDD:269945 27/183 (15%)
STKc_PKD 539..798 CDD:270984 81/291 (28%)
S_TKc 547..799 CDD:214567 80/284 (28%)
CLA4NP_014101.1 PH_Cla4_Ste20 62..174 CDD:270097 19/120 (16%)
PBD 183..241 CDD:395634 8/57 (14%)
STKc_PAK 546..826 CDD:270789 80/291 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.