DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PKD and CPK2

DIOPT Version :9

Sequence 1:NP_001262705.1 Gene:PKD / 42203 FlyBaseID:FBgn0038603 Length:906 Species:Drosophila melanogaster
Sequence 2:NP_001326044.1 Gene:CPK2 / 820235 AraportID:AT3G10660 Length:646 Species:Arabidopsis thaliana


Alignment Length:275 Identity:90/275 - (32%)
Similarity:145/275 - (52%) Gaps:10/275 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   531 EEQVQDMGQLYQIFPDEVLGSGQFGVVYGGVHKKTQREVAIKVIDKLRFPTKQEAQ-LKNEVAIL 594
            :.:.::..:.|.:  ...||.||||..:..:.|.|..|.|.|.|.|.:..|.::.: ::.|:.|:
plant   176 QRKTENFKEFYSL--GRKLGQGQFGTTFLCLEKGTGNEYACKSISKRKLLTDEDVEDVRREIQIM 238

  Fly   595 QNIS-HCGVVNLERMFETPERIFVVMEKLK-GDMLEMILSHARGRLSERVTKFLITQILIALKYL 657
            .::: |..|::::..:|....:.:|||... |::.:.|:.  ||..:||....|...|:..|:..
plant   239 HHLAGHPNVISIKGAYEDVVAVHLVMELCSGGELFDRIIQ--RGHYTERKAAELARTIVGVLEAC 301

  Fly   658 HSQNIVHCDLKPENVLLSSDAEFPQVKLCDFGYARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNR 722
            ||..::|.||||||.|..|..|...:|..|||.:...........|||:|.|:|||||| |.|..
plant   302 HSLGVMHRDLKPENFLFVSREEDSLLKTIDFGLSMFFKPDEVFTDVVGSPYYVAPEVLR-KRYGP 365

  Fly   723 SLDMWSVGVIIYVSLSGTFPF--NEEEDINDQIQNAAFMYPPNPWKEISSNAIDLINNLLQVKQR 785
            ..|:||.|||:|:.|||..||  ..|:.|.:|:.:....:..:||..||.:|.||:..:|....:
plant   366 ESDVWSAGVIVYILLSGVPPFWAETEQGIFEQVLHGDLDFSSDPWPSISESAKDLVRKMLVRDPK 430

  Fly   786 KRYTVDKSLLHYWLQ 800
            :|.|..:.|.|.|:|
plant   431 RRLTAHQVLCHPWVQ 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PKDNP_001262705.1 C1_1 109..154 CDD:278556
C1 223..272 CDD:197519
PH_PKD 396..522 CDD:269945
STKc_PKD 539..798 CDD:270984 88/263 (33%)
S_TKc 547..799 CDD:214567 87/256 (34%)
CPK2NP_001326044.1 PspC_subgroup_2 <45..>159 CDD:411408
STKc_CAMK 185..443 CDD:270687 88/262 (34%)
PTZ00184 480..622 CDD:185504
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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