DRSC/TRiP Functional Genomics Resources

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Protein Alignment PKD and prkd3

DIOPT Version :9

Sequence 1:NP_001262705.1 Gene:PKD / 42203 FlyBaseID:FBgn0038603 Length:906 Species:Drosophila melanogaster
Sequence 2:XP_002940552.3 Gene:prkd3 / 100486348 XenbaseID:XB-GENE-6036037 Length:815 Species:Xenopus tropicalis


Alignment Length:849 Identity:426/849 - (50%)
Similarity:534/849 - (62%) Gaps:109/849 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 QFGSVRDAVCVPANSLTLKTLKDLACDFINTKIPDSGLTYLSERILLFVHDYSTPNVLHIINSAA 75
            |.|..|:...:........|:|.||.|.:..:.|:.|...:||:|.||.|:.|:.|||..:....
 Frog    16 QIGLSREFYQIQPCDANYNTVKKLAMDLVEKQHPEFGFLGVSEKIQLFRHNLSSQNVLERLFPNN 80

  Fly    76 EVVDETLVEIVLTASPILYPTSEMPTLKPHSLNVHSYKGPTFCDFCGEMLFGLVRQGLKCDGCGQ 140
            .:.:..|:|:||.||     .|...:::||.|.|||||.|.|||:|||||:|||||||||.|||.
 Frog    81 FIQEGDLIEVVLPAS-----VSLDFSIRPHILLVHSYKSPAFCDYCGEMLWGLVRQGLKCQGCGL 140

  Fly   141 NYHKRCVVKIPNNCNR-SNDATSRRSFTLQAPRSPSGSSQQSLVSTED-STGRNDSSSSLNIPGR 203
            ||||||..||||||.. .....|.||||......|..|...|.||.|| ....:||.....:..:
 Frog   141 NYHKRCAFKIPNNCRGVKRGQLSSRSFTGNQTNKPKASPIPSGVSLEDLGAHYSDSRDIYQLIQK 205

  Fly   204 HQRTHSSGSR------NGLMVLRIPHTFMVHTYGIPTVCQLCKKLLKGLFKQGLQCRDCQYNTHK 262
            ..|..|...|      ..:..:::||||.||:|..||:||.|::||||||:||:||:||::|.|:
 Frog   206 KPRVPSIIGRPIWKDCEEINKVKVPHTFQVHSYTRPTICQHCRRLLKGLFRQGMQCKDCRFNCHR 270

  Fly   263 KCMDKVPHDCTGEAQLSQLQIQAGAKERDNFFREEFDDSDGDDGSEYGKYKSAMSSGVNLVAGRP 327
            :|::.||.:|.|                      |....|.:|..|........:.|.|      
 Frog   271 RCVEYVPDECLG----------------------EISHPDEEDAEEDIDSVRQTNLGTN------ 307

  Fly   328 REAPKALTNAHNSPPELVNGGLVDDSSVSGGETSKSSSDGQSEQSQSSTSSSPSANIPLMRIVQS 392
                      |...         |:.|..|.|:|..|.:.::....|:.       |||||:|||
 Frog   308 ----------HQDE---------DEMSFKGSESSDLSCNIENSMFDSNF-------IPLMRVVQS 346

  Fly   393 VKHTKKRGGQALKEGWLVHYTSLDKAVKRYYWRLDSKTITLFVSEQGSKYHKELPLAELLSIESH 457
            |:|.||:....|.||||||:||.|...|::||:||||.||||.:|.|.||:|||||:::|.||::
 Frog   347 VRHNKKKNSYVLMEGWLVHFTSKDSMRKKHYWQLDSKCITLFHNESGGKYYKELPLSDILHIEAY 411

  Fly   458 --------LGDPRPECNYCFELRLPNLSYFVGQDPQVGAKEEQAVRLPPPDSGIGSDIAKSWETS 514
                    ||...|   :||||....|.|:||        |..:..:   |||      :.|...
 Frog   412 DKNTSGRPLGGETP---HCFELLTDTLVYYVG--------ERSSTHI---DSG------EKWYRM 456

  Fly   515 IRQAF---MHVTNTQCCESEEQVQ----------DMGQLYQIFPDEVLGSGQFGVVYGGVHKKTQ 566
            ||||.   |:...:....::..||          |:..:|||||||||||||||:||||.|:||.
 Frog   457 IRQALFAGMNDNTSSRASTKANVQGENGEYQQNLDISHMYQIFPDEVLGSGQFGIVYGGKHRKTG 521

  Fly   567 REVAIKVIDKLRFPTKQEAQLKNEVAILQNISHCGVVNLERMFETPERIFVVMEKLKGDMLEMIL 631
            |:||||||||||||::||:||:||||||||:...|||:||.|.|||||||||||||.||||||||
 Frog   522 RDVAIKVIDKLRFPSRQESQLRNEVAILQNLRFHGVVDLEAMCETPERIFVVMEKLHGDMLEMIL 586

  Fly   632 SHARGRLSERVTKFLITQILIALKYLHSQNIVHCDLKPENVLLSSDAEFPQVKLCDFGYARIIGE 696
            |..:|:|.||:|:||:||||.||::|||:||||||||||||||:::..|||:||||||:||||||
 Frog   587 SSDKGKLPERITRFLVTQILTALQHLHSKNIVHCDLKPENVLLATEDPFPQIKLCDFGFARIIGE 651

  Fly   697 KSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEEEDINDQIQNAAFMYP 761
            |||||||||||||||||||||.|||||||||||||||||||||||||||:|||||||||||||||
 Frog   652 KSFRRSVVGTPAYLAPEVLRNSGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYP 716

  Fly   762 PNPWKEISSNAIDLINNLLQVKQRKRYTVDKSLLHYWLQDKQTYRDLRNLEAQVGAGRYLTHEAD 826
            .|||.|||::||||||:|||||.|||::|.|:|.|.|:||..|:.|||.||.:||. ||:|||:|
 Frog   717 KNPWNEISNDAIDLINSLLQVKIRKRFSVHKALSHPWMQDFNTWLDLRELETRVGQ-RYITHESD 780

  Fly   827 DLRW 830
            |.||
 Frog   781 DARW 784

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PKDNP_001262705.1 C1_1 109..154 CDD:278556 36/44 (82%)
C1 223..272 CDD:197519 28/48 (58%)
PH_PKD 396..522 CDD:269945 56/136 (41%)
STKc_PKD 539..798 CDD:270984 207/258 (80%)
S_TKc 547..799 CDD:214567 201/251 (80%)
prkd3XP_002940552.3 C1_1 109..155 CDD:365894 37/45 (82%)
C1 231..280 CDD:237996 28/48 (58%)
PH_PKD 351..461 CDD:269945 54/129 (42%)
STKc_PKD 495..753 CDD:270984 207/257 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 437 1.000 Domainoid score I555
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 839 1.000 Inparanoid score I440
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D182843at33208
OrthoFinder 1 1.000 - - FOG0002280
OrthoInspector 1 1.000 - - otm48955
Panther 1 1.100 - - O PTHR22968
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1509
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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