Protein Alignment CG18600 and RPA49

DIOPT Version :9

• Sequence 1: NP_650708.1
• Gene: CG18600 / 42201
• FlyBaseID: FBgn0038601
• Length: 384
• Species: Drosophila melanogaster
• Sequence 2: NP_014151.1
• Gene: RPA49 / 855473
• SGDID: S000005192
• Length: 415
• Species: Saccharomyces cerevisiae
• Alignment Length: 439
• Identity: 93/439 - (21%)
• Similarity: 186/439 - (42%)
• Gaps: 100/439 - (22%)

  Fly     4 KIIIESVCDHKRDENIPTILK---FQNGSLLGDADFSMV--------ESTVDGKKHALVYAGDQV 57
            :|.||||.|.      |::..   |:......|..|.:.        |..:.|:...|.|.|
Yeast     9 EIEIESVQDQ------PSVAVGSFFKGFRAPSDTTFDLYKKKKSEKDEFVLHGENERLEYEG--- 64

  Fly    58 YTGEVKDSEEVDTYI---FIRNKLTNKVKVVPVQEALMYNHVYKKLERQKRTGPTMSREHANKKL 119
            ||.  ..|:..:.|:   |...|.:.::...||..:.:.:...|.|...|....:.:|..|.:..
Yeast    65 YTD--SSSQASNQYVVGLFNPEKKSIQLYKAPVLVSKVVSKSSKNLRGPKIKSKSDTRPSALRNA 127

  Fly   120 LKE-FGGRKASRFVDNREQMMVNVEVMRQDLDETVNSSMLNEDEED----GTLGDVSINNEEYLA 179
            |.| ||.:||.:.:.:.|:..::.:.:.....:.|:|  :....:|    ..|.:::.|:..
Yeast   128 LGEAFGTKKAKKAIADLERNRIDSDKLTDSAIDIVDS--VRTASKDLPTRAQLDEITSNDRP--- 187

  Fly   180 SIVPEFNKEATKVDEVYAVESLIP---------SSLLERLEEEAKV-VFSTPVQTLPIKSEYLKS 234
              .|..|.:||.|:::|.:||:||         ||:|:..::|.|: :|  |.|.   .|:|:..
Yeast   188 --TPLANIDATDVEQIYPIESIIPKKELQFIRVSSILKEADKEKKLELF--PYQN---NSKYVAK 245

  Fly   235 CLAKIQENPVSSKRDFLHIKLIIYMDALQSL-----ISLRSRQMQKAELSGITEKIENDIRHRFA 294
            .|..:.:....:|     ::|:.|:..|..:     ::.:::.:::  |:...|.:.:.|..||
Yeast   246 KLDSLTQPSQMTK-----LQLLYYLSLLLGVYENRRVNNKTKLLER--LNSPPEILVDGILSRF- 302

  Fly   295 DPNVAKKGTRTNFSSEKALTHFI-----------VMALLLS-EKFEVDINVLSRALATTKARIKQ 347
              .|.|.|   .|...|..::||           ::|:::. :.|.|:|..|:..|....:::..
Yeast   303 --TVIKPG---QFGRSKDRSYFIDPQNEDKILCYILAIIMHLDNFIVEITPLAHELNLKPSKVVS 362

  Fly   348 YAHIVNA--------------LPKSNS---DILSLRLPSKVPAL-KSGR 378
            ...::.|              :|||.:   .|.::::|.|:|.: :.||
Yeast   363 LFRVLGAIVKGATVAQAEAFGIPKSTAASYKIATMKVPFKLPEMTRRGR 411

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG18600	NP_650708.1	RNA_pol_I_A49	33..379	CDD:284324	85/407 (21%)
RPA49	NP_014151.1	RNA_pol_I_A49	33..411	CDD:399688	83/407 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C157343747
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4183
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	LDO	PTHR14440
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.930