DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18600 and Y45G5AM.7

DIOPT Version :9

Sequence 1:NP_650708.1 Gene:CG18600 / 42201 FlyBaseID:FBgn0038601 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_504160.1 Gene:Y45G5AM.7 / 178817 WormBaseID:WBGene00021559 Length:433 Species:Caenorhabditis elegans


Alignment Length:382 Identity:77/382 - (20%)
Similarity:150/382 - (39%) Gaps:108/382 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NGSLLGDADFS-MVESTVDGK-KHALVY----AGDQVYTGEVKDSEEVDTYIFIRNKLTNKVKV- 84
            |.||:.|.:.. :...:|.|. |:..::    |..:.|| :::|.|.: ..|...|.:.|:|:: 
 Worm    12 NSSLVRDPEIERLAPVSVKGSDKYTAIFQDLKASWKKYT-DLEDGERI-AAILRDNSVENEVELL 74

  Fly    85 -------------VPVQEALMYNHVYKKLER------------QKRTGP----TMSR-EHANKKL 119
                         |.:::..:......:|.|            :.|.|.    .|.: |.|...:
 Worm    75 SKMSENEIADLFRVKLRKVAILEEENDQLHRRNRDLSHRLHLVEHRVGKAQIVVMEKVEKATGHI 139

  Fly   120 LKEFGGRK--ASRFVDNREQMMVNVEVMRQDLDETV---NSSMLNEDEEDGTLGDVSINNEEYLA 179
            ::||..|:  .:|.|:..::...|:....:.|:|||   :..:.|.:..:..|.:::::||    
 Worm   140 IQEFHERELDLARNVEILQEENSNLTAKNEKLEETVDDLHEKVANLETSNKELTEINVDNE---- 200

  Fly   180 SIVPEFNKEATKVDEVYAVESLIPSSLLERLEEEAKVVFSTPVQTLPIKSEYLKSCLAKIQENPV 244
                  .|.:...||:::::.|:..:.:: ||||.:.|.........:|:::||       |...
 Worm   201 ------RKISNSSDEIFSLQDLLGKTKVQ-LEEETEKVLQERTIVENLKAQFLK-------ERKE 251

  Fly   245 SSKRDFLHIKLIIYMDALQSLISLRSRQMQKAELSGITEKIENDIRHRFADPNVAKKGTRTNFSS 309
            |:::    |:||                 || |.....::||.|||:            |.....
 Worm   252 STEK----IELI-----------------QK-EAEDYRKRIEEDIRN------------RQQRHK 282

  Fly   310 EKALTHFIVMALLLSEKFEVDIN----VLSRALATTKARIKQYAHIVNALPKSNSDI 362
            ::...|        .|||...:|    |:.....|.|.:..:.|.:.:.|.|..|.|
 Worm   283 KEVDAH--------QEKFSATVNHQNAVIEELTQTVKQKQSEIAELKDQLEKQESRI 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18600NP_650708.1 RNA_pol_I_A49 33..379 CDD:284324 74/376 (20%)
Y45G5AM.7NP_504160.1 Smc <81..348 CDD:224117 61/311 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
10.960

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