DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dlc90F and CG12836

DIOPT Version :9

Sequence 1:NP_477356.1 Gene:Dlc90F / 42199 FlyBaseID:FBgn0024432 Length:111 Species:Drosophila melanogaster
Sequence 2:NP_001286153.2 Gene:CG12836 / 35630 FlyBaseID:FBgn0033140 Length:174 Species:Drosophila melanogaster


Alignment Length:106 Identity:17/106 - (16%)
Similarity:43/106 - (40%) Gaps:7/106 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SQFIVDDVSKTIKEAIETTIGGNAYQHDKVNNWTG-QVVENCLTVLTKEQKP-----YKYIVTAM 66
            :.|.::...|.|::.||..:..:.:..: .::|.. |:.|.....:....|.     ::.:....
  Fly    65 TNFNMERAQKIIEDCIEERLLWDRFSRN-YDSWRALQLAEGLAAEIRDRVKKLNHRRHRIVCLLS 128

  Fly    67 IMQKNGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSVF 107
            |::|...|::.......:...|....:.:|..|.:.||.::
  Fly   129 IVEKQNQGVYQRMCHLMDEKRDNFTQLVFERPTYFMIVVLY 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dlc90FNP_477356.1 DLC-like_DYNLT1 10..111 CDD:412010 17/104 (16%)
CG12836NP_001286153.2 Tctex-1 71..172 CDD:281624 16/100 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440457
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21255
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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