DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dlc90F and dlc1

DIOPT Version :10

Sequence 1:NP_477356.1 Gene:Dlc90F / 42199 FlyBaseID:FBgn0024432 Length:111 Species:Drosophila melanogaster
Sequence 2:NP_001018252.1 Gene:dlc1 / 3361491 PomBaseID:SPAC1805.08 Length:111 Species:Schizosaccharomyces pombe


Alignment Length:96 Identity:25/96 - (26%)
Similarity:48/96 - (50%) Gaps:5/96 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 EAIETTIGGNAYQHDKVNNWTGQVVENCLTVLTKEQKPYKYIVTAMIMQK-----NGAGLHTASS 80
            ||.:..:..:.|..||.......|:...|..|.||.:.||:||::.::||     ...|:|.|.:
pombe    16 EAAQPVLKASEYDGDKTAEMNQSVIYAVLNALNKETQSYKWIVSSTLVQKLPEDHPSRGVHAAHA 80

  Fly    81 CYWNNDTDGSCTVRWENKTMYCIVSVFGLAV 111
            ..||.:.||..|::...:.:..::|:..:::
pombe    81 ACWNCEKDGMTTIKESGEAIDVVLSIMWISI 111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dlc90FNP_477356.1 DLC-like_DYNLT1 10..111 CDD:412010 25/94 (27%)
dlc1NP_001018252.1 DLC-like_SpDlc1-like 4..110 CDD:412004 25/93 (27%)

Return to query results.
Submit another query.