DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8064 and SPBC3D6.12

DIOPT Version :9

Sequence 1:NP_650705.1 Gene:CG8064 / 42196 FlyBaseID:FBgn0038597 Length:922 Species:Drosophila melanogaster
Sequence 2:NP_595524.1 Gene:SPBC3D6.12 / 2540971 PomBaseID:SPBC3D6.12 Length:922 Species:Schizosaccharomyces pombe


Alignment Length:984 Identity:314/984 - (31%)
Similarity:518/984 - (52%) Gaps:138/984 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LTKQYLAYRAIDSFNIITSGRANV--NFAVVDKTEGRYVAAPAAENVIVWDLRMGDRKLTLRREK 65
            :.|.|..|...:.|.:|.|...|:  ..:...|:.||.:.. ..|:|:.|||:.|.   .|.:.|
pombe     1 MVKSYTRYEPTEFFGVIASSGCNILGQPSSSAKSVGRAIVG-GLESVLEWDLKTGQ---LLSKWK 61

  Fly    66 FEVTSLRVSP----DHLHIAVGYADGMVQIFDLSSDRYYDPICTLALHKNAVSILRYDLQGMRLV 126
            ....|.:|:.    |.:: |||||||.::::     :..:.:.||..||:||:.:.:|..|.||.
pombe    62 DSDCSAKVTCIANFDEMY-AVGYADGSIRLW-----KDGELLITLNGHKSAVTTMDFDKMGTRLA 120

  Fly   127 SGGLDTELVVVDVVEQAGRARLSGHNAAITDAHFL---------QRLVD---------------E 167
            ||.:||:::|.|:|.:.|..||.||...||...|:         :.:||               :
pombe   121 SGSMDTDIIVWDIVAETGLFRLRGHKDQITKLLFITPPSKNTAEETVVDTDIDSGDMDVDSKSSD 185

  Fly   168 SIVVSCSKDTQIKFWNLETQFCFKTIVDNRTEVWALAF---IGNLMVAGAGESGMNVYRLRKHDG 229
            |.::|..||:.:|.|:|..|.|.:|.||::.|:||:..   ....:.||.| |.:.|:.      
pombe   186 SFLLSVGKDSFMKLWDLSIQHCVETHVDHQGEIWAMCVSPDAKRCLTAGTG-SDVKVWE------ 243

  Fly   230 AITETLESAVEGLSIDDEDTISPI--SVSNCGTIQRAGKGRTVNLVTDPSERVISCHGTNDLIEN 292
                        :|..|::..:|.  :....||..|..:.|.:.|..|.|.|.:.....:.|:|.
pombe   244 ------------ISFPDDNNFTPTTKAFQQLGTFTRQSRDRPITLAYDVSNRYVVFQAHDRLLEV 296

  Fly   293 FYICTPDEVKKRLAKRLKKEKKVAEDEGSDEAKLSTEQSLSDEIKRLESIRAKQKIKSIDVVLGQ 357
            |.:.:..|::|.|.:|.:::|       |::..:    :|.||.:....||...:..|:..:.| 
pombe   297 FRLRSSAELEKILNRRRRRKK-------SEDVSI----TLKDEYEPFALIRTTARASSVAWIPG- 349

  Fly   358 NQELRVLVSLANNSLCLYSLEASIKTRKATDPSAKLLRSLTRL------GHQSEVRSVCFSNDSL 416
            |:...::.||.|||:.:|:|:.     |:...:|.|....:|:      ||:::||::..|.:..
pombe   350 NRTPTLVTSLQNNSIEVYALDV-----KSEGSAAPLTERASRISAIEIPGHRADVRTLALSANHD 409

  Fly   417 AIGSGAGESFKFWDRDAMQCLRTVPTDYILCSKFVPGDRYVLLGMKSGKLLIVDVAAADIVEEIP 481
            .|.|||..|.|.|::....|:||:...|:|.:.|:..|:.::...|||:|.:.|:|::.::|.|.
pombe   410 VILSGANGSLKLWNKKTTSCIRTIECGYVLAASFINNDKCIVSAYKSGELEVYDIASSSLIERIQ 474

  Fly   482 AHEGELWSIAILPDQKGCVTGSGDTTVKIWTFE-LIDAGEGAAQTKVLSLLHKNTLKLEET---- 541
            ||:|.:|.:|:..|.....|.|.|.|||:|:.: ..|...|..: ||      .|||||:|    
pombe   475 AHDGAIWDLAVGHDGTYFATASADHTVKLWSLKSSFDFVPGTTR-KV------TTLKLEQTRQID 532

  Fly   542 ----VLCLAVSPDMKYLAVGLLDATVKVFFLDTFKFYLSLYGHKLPVICLDISYDSNLIVTGSAD 602
                ||.:.:|||.:::|..|||.||||::||:.||:|:||||||||:.:||||||.|:||.|||
pombe   533 FTDDVLAVKISPDGRFVAASLLDNTVKVYYLDSLKFFLNLYGHKLPVLSMDISYDSKLLVTCSAD 597

  Fly   603 RNVKVWGLNFGDCHRSIFAHDDSVMSVQFIPRTHMFFTCGKDGKVKQWDGDNFEKILTLPGHIGE 667
            :|||:|||:|||||:|||||.||:|.|.|.|.|:.||||.||.:|:.|||.:|:.||.|.||..|
pombe   598 KNVKIWGLDFGDCHKSIFAHQDSIMEVTFQPDTYNFFTCSKDREVRYWDGKSFDLILKLRGHHSE 662

  Fly   668 AYCLSVSPNGRYLVTCGSDRTLRMFERTDETIVLKDVQEEEREQM---------ENEQLATGE-- 721
            .:.|:|.|.  ::|:...|.::|::|:.|:.:.|::.:|.|.|:.         ||.: |.||  
pombe   663 VWALAVGPT--FVVSGSHDHSIRLWEQGDDLVFLEEERERELEEQYESTLVSSYENAE-ADGEVK 724

  Fly   722 DNTVPLLPGLKMPSRKTVGSEQSAESILECLEI-------SKQFELEAEEKP-----ELHPLMQA 774
            |..|..:      :::|:.|.:..|.|||.:.|       ..|:.|:..:.|     ..:|::..
pombe   725 DGDVAAV------TKQTIESLKDGEKILEAITIGIEDLDQEIQYRLDLLKSPGKARGPRNPILAH 783

  Fly   775 LQVKNPEDFLVSTLMRIRASDLEEALLLLPFSTVCEVLERLPTLLTQRPDQLELLCRVTIFLFKV 839
            |.| :.|:::::|..:||:|.|::|||:|||..|.. |.|...:...|...:.|:.|:..||.:.
pombe   784 LGV-SAEEYVLNTFKKIRSSHLDDALLVLPFEHVLS-LFRFIDIWASRKWSIPLVSRIIFFLLRT 846

  Fly   840 HMKPISAAKNMKPLLVKLLSMLKRDVGQLRDVLGWNLHGLALLQTEVEQRDGVQLFREATQTRKK 904
            :.:.::....|:|||..:.|.|:..:.:.|.::|:|..||:.|:.|.|......| .:...|..:
pombe   847 YHRQLTTTVKMRPLLNNIRSSLRGSLQEERSLIGYNAAGLSYLRHEWELTHNTSL-EDIDSTSLE 910

  Fly   905 RDKKRREAS 913
            .|.|:|..|
pombe   911 VDGKKRAFS 919

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8064NP_650705.1 WD40 <45..288 CDD:225201 76/275 (28%)
WD40 60..511 CDD:295369 137/489 (28%)
WD40 repeat 69..108 CDD:293791 12/42 (29%)
WD40 repeat 113..149 CDD:293791 14/35 (40%)
WD40 repeat 156..194 CDD:293791 14/61 (23%)
WD40 repeat 200..236 CDD:293791 7/38 (18%)
WD40 331..702 CDD:225201 155/385 (40%)
WD40 repeat 349..398 CDD:293791 13/48 (27%)
WD40 401..693 CDD:238121 134/300 (45%)
WD40 repeat 408..441 CDD:293791 11/32 (34%)
WD40 repeat 446..482 CDD:293791 11/35 (31%)
WD40 repeat 487..535 CDD:293791 14/48 (29%)
WD40 repeat 543..578 CDD:293791 17/34 (50%)
WD40 repeat 584..621 CDD:293791 26/36 (72%)
WD40 repeat 626..662 CDD:293791 18/35 (51%)
WD40 repeat 669..692 CDD:293791 6/22 (27%)
Utp12 780..882 CDD:281932 31/101 (31%)
SPBC3D6.12NP_595524.1 WD40 45..368 CDD:238121 97/362 (27%)
WD40 repeat 70..102 CDD:293791 10/37 (27%)
WD40 repeat 107..156 CDD:293791 20/48 (42%)
WD40 152..656 CDD:225201 186/546 (34%)
WD40 repeat 177..212 CDD:293791 10/34 (29%)
WD40 repeat 218..266 CDD:293791 12/66 (18%)
WD40 repeat 274..324 CDD:293791 13/60 (22%)
WD40 repeat 342..394 CDD:293791 14/57 (25%)
WD40 391..686 CDD:238121 134/303 (44%)
WD40 repeat 400..434 CDD:293791 12/33 (36%)
WD40 repeat 438..474 CDD:293791 10/35 (29%)
WD40 repeat 481..532 CDD:293791 20/57 (35%)
WD40 repeat 537..573 CDD:293791 18/35 (51%)
WD40 repeat 579..614 CDD:293791 24/34 (71%)
WD40 repeat 621..645 CDD:293791 12/23 (52%)
WD40 repeat 663..685 CDD:293791 6/23 (26%)
Utp12 789..889 CDD:281932 31/100 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 61 1.000 Domainoid score I3007
eggNOG 1 0.900 - - E1_KOG0306
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4937
Inparanoid 1 1.050 455 1.000 Inparanoid score I294
OMA 1 1.010 - - QHG54117
OrthoFinder 1 1.000 - - FOG0004801
OrthoInspector 1 1.000 - - oto101169
orthoMCL 1 0.900 - - OOG6_102330
Panther 1 1.100 - - LDO PTHR19853
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1713
SonicParanoid 1 1.000 - - X3383
TreeFam 1 0.960 - -
1413.860

Return to query results.
Submit another query.