DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7142 and Prss52

DIOPT Version :10

Sequence 1:NP_650703.1 Gene:CG7142 / 42194 FlyBaseID:FBgn0038595 Length:334 Species:Drosophila melanogaster
Sequence 2:NP_001419997.1 Gene:Prss52 / 683422 RGDID:1586868 Length:312 Species:Rattus norvegicus


Alignment Length:295 Identity:81/295 - (27%)
Similarity:126/295 - (42%) Gaps:45/295 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 KCGGGRSAGAAHTMAMNLAAYGLLENRISTLEAPRQTHWTKKFLAKREATPHSAPYVVSIQMMTP 102
            |||.|            |:...||:..:|.:            :..:.|.....|:.|.|.    
  Rat    28 KCGQG------------LSTRPLLQENVSAI------------MGGKPANISEVPWHVGIM---- 64

  Fly   103 DQGLVHYCAGTIINEHWILTAAHCLSSPQAVENSVIVAGSHDIHDQKGEASNIQMRHIDYYVRHE 167
            :.| .|.|.|:|:||.|:|:|:||....... |..|..|..|:     ...|::...:|..:.|.
  Rat    65 NHG-THLCGGSILNEWWVLSASHCFDQINNA-NLEIRHGRDDL-----STKNVKHEKVDKLILHP 122

  Fly   168 LYLGGVNPYDIALIYTKEPLVFDTYVQPATLPE-QDAQPEGYGTLYGWGNVSMTAVPNYPHRLQE 231
            .:...:...||||:..|.||.......|....| .|.:......:.|||..:::.|.....:||:
  Rat   123 KFDDWLLDNDIALLLLKSPLNLSINGIPICTSELSDLRIWKNCWVTGWGITNVSGVKVQTTKLQK 187

  Fly   232 ANMPILDMELCEQILARSGLPLHETN-LCTGPLTGGVSICTADSGGPLIQQCCEEHFEQANIVIG 295
            ..:.:...:.|..:     |||...| ||.|...||:..|..||||.|:  |.::........:|
  Rat   188 VQVDLFRWDWCGYV-----LPLLTKNMLCAGTPDGGMDACQGDSGGALV--CNKKRNINTWYQVG 245

  Fly   296 IVSWGKMPCGQKNAPSVFVRVSAFTEWINQVISTA 330
            ||||| :.||:||.|.|:.:||.:.:||.:..:.|
  Rat   246 IVSWG-VGCGKKNLPGVYTKVSPYLKWIRKQTAKA 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7142NP_650703.1 Tryp_SPc 84..326 CDD:238113 72/243 (30%)
Prss52NP_001419997.1 Tryp_SPc 46..275 CDD:238113 72/259 (28%)

Return to query results.
Submit another query.