DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7142 and st14

DIOPT Version :9

Sequence 1:NP_650703.1 Gene:CG7142 / 42194 FlyBaseID:FBgn0038595 Length:334 Species:Drosophila melanogaster
Sequence 2:XP_012821897.2 Gene:st14 / 448647 XenbaseID:XB-GENE-1008784 Length:845 Species:Xenopus tropicalis


Alignment Length:385 Identity:86/385 - (22%)
Similarity:146/385 - (37%) Gaps:88/385 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LSYRCIYSVLLSTIASIMVVLSSASSGSIQLP-----TVRKCGGGR------------------- 43
            |.:||..|.|......:...::.....|.:|.     ...|||.|:                   
 Frog   479 LQFRCTNSKLCKPSYFVCDGVNDCGDSSDELACQCPNNTYKCGNGKCIPESQKCDRTDNCGDGSD 543

  Fly    44 --SAGAAHTMAMNLAAYGLLENRISTLEAPR---------------------QTHWTKK--FLAK 83
              ..|...:.......|....|:..|.:.|.                     :..:|||  .:..
 Frog   544 EAECGRVLSTTCTEYTYKCKNNQCITKKNPECDGENDCSDGSDEISAKCNCGKRPFTKKSRIVGG 608

  Fly    84 REATPHSAPYVVSIQMMTPDQGLVHYCAGTIINEHWILTAAHCLSSPQAVENS-----VIVAGSH 143
            ..|.....|:.||:.:    :|..|.|..::::...:::||||....|::..|     ....|.|
 Frog   609 VNADTGEFPWQVSLHV----KGNKHTCGASLVSPTMLISAAHCFQDDQSMRYSDASLWTAYLGLH 669

  Fly   144 DIHDQKGEASNIQMRHIDYYVRHELYLGGVNPYDIALIYTKEPLVFDTYVQPATLPEQD-----A 203
            |  ..:..:.::..|.|...:.|..:.......||:::..::|:.:..::||..:||..     .
 Frog   670 D--QAQLNSKDVVERKIKRIMAHIGFNDNTYDNDISVLELEKPVDYTDFIQPICIPESTHDFPVG 732

  Fly   204 QP---EGYGTLYGWGNVSMTAVPNYPHRLQEANMPILDMELCEQILARSGLPLHETNLCTGPLTG 265
            :|   .|:|.|...|..::.        ||:|.:.|::...|.::|.....|   ..||.|.::|
 Frog   733 KPIWVTGWGALKEGGGAAVI--------LQKAEIRIINQTECNKLLDGQLTP---RMLCAGFVSG 786

  Fly   266 GVSICTADSGGPLIQQCCEEHFEQANIV--IGIVSWGKMPCGQKNAPSVFVRVSAFTEWI 323
            |:..|..||||||      ...|..|.|  .||||||: .|.::|.|.|:.||:...:||
 Frog   787 GIDACQGDSGGPL------SSVELNNKVYLAGIVSWGE-GCARRNKPGVYTRVAMMRDWI 839

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7142NP_650703.1 Tryp_SPc 84..326 CDD:238113 67/255 (26%)
Tryp_SPc 84..323 CDD:214473 65/253 (26%)
st14XP_012821897.2 SEA 76..167 CDD:396113
CUB 216..320 CDD:238001
CUB 328..432 CDD:238001
LDLa 442..474 CDD:238060
LDLa 476..511 CDD:238060 7/31 (23%)
LDLa 513..547 CDD:238060 4/33 (12%)
LDLa 554..587 CDD:197566 4/32 (13%)
Tryp_SPc 604..839 CDD:214473 65/258 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D433637at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.