DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7142 and Klkb1

DIOPT Version :10

Sequence 1:NP_650703.1 Gene:CG7142 / 42194 FlyBaseID:FBgn0038595 Length:334 Species:Drosophila melanogaster
Sequence 2:NP_036857.2 Gene:Klkb1 / 25048 RGDID:67382 Length:638 Species:Rattus norvegicus


Alignment Length:259 Identity:72/259 - (27%)
Similarity:118/259 - (45%) Gaps:53/259 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 PYVVSIQMMTPDQGLVHYCAGTIINEHWILTAAHCLSSPQAVENSVIVAGSHDIHDQKGEASNIQ 156
            |:.||:|:....|.  |.|.|:||...||||||||.......:...|..|..::.:...:.....
  Rat   403 PWQVSLQVKLVSQN--HMCGGSIIGRQWILTAAHCFDGIPYPDVWRIYGGILNLSEITNKTPFSS 465

  Fly   157 MRHIDYYVRHELYLGGVNPYDIALIYTKEPLVFDTYVQPATLPEQDAQPEGYGTLY------GWG 215
            ::.:   :.|:.|......||||||..:.||.:..:.:|..||.:    ....|:|      |||
  Rat   466 IKEL---IIHQKYKMSEGSYDIALIKLQTPLNYTEFQKPICLPSK----ADTNTIYTNCWVTGWG 523

  Fly   216 ---------NVSMTAVPNYPHRLQEANMPILDMELCEQ-----ILARSGLPLHETNLCTGPLTGG 266
                     |:           ||:|.:|::..|.|::     ::.:.       .:|.|...||
  Rat   524 YTKERGETQNI-----------LQKATIPLVPNEECQKKYRDYVITKQ-------MICAGYKEGG 570

  Fly   267 VSICTADSGGPLIQQCCEEHFEQANIVIGIVSWGKMPCGQKNAPSVFVRVSAFTEWINQVISTA 330
            :..|..||||||:   | :|..:..:| ||.|||: .|.:|..|.|:.:|:.:.:||.:.|.::
  Rat   571 IDACKGDSGGPLV---C-KHSGRWQLV-GITSWGE-GCARKEQPGVYTKVAEYIDWILEKIQSS 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7142NP_650703.1 Tryp_SPc 84..326 CDD:238113 71/253 (28%)
Klkb1NP_036857.2 APPLE 21..104 CDD:128519
APPLE 111..194 CDD:128519
APPLE 201..284 CDD:128519
APPLE 292..375 CDD:128519
Tryp_SPc 391..621 CDD:238113 69/250 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.