DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7142 and svh-1

DIOPT Version :10

Sequence 1:NP_650703.1 Gene:CG7142 / 42194 FlyBaseID:FBgn0038595 Length:334 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:253 Identity:71/253 - (28%)
Similarity:121/253 - (47%) Gaps:32/253 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 EATPHSAPYVVSIQMMTPDQGLVHYCAGTIINEHWILTAAHCLSSPQAVENSVIVAGSHDIHDQK 149
            |..|.:.|:..:::.....   .|:|..:|:::..::|||||....:.|.:..:|.|..|.:...
 Worm   718 ETVPGAFPWTAALRNKATK---AHHCGASILDKTHLITAAHCFEEDERVSSYEVVVGDWDNNQTD 779

  Fly   150 GEASNIQMRHIDYYVRHELYLGGVNPYDIALIYTKEP-LVFDTYVQPATLPEQD--AQPEGYGTL 211
            |......::.|.:|..::    .:..:|||::....| :.|:.|.||..||.:|  ..|.....:
 Worm   780 GNEQIFYLQRIHFYPLYK----DIFSHDIAILEIPYPGIEFNEYAQPICLPSKDFVYTPGRQCVV 840

  Fly   212 YGWGNVSMTAVPNYPHRLQEANMPILDMELC---EQI---LARSGLPLHETNLCTGPLTGGVSIC 270
            .|||::.:    .|..|||.|.:||::...|   .||   ::||.       .|.|.|.||:..|
 Worm   841 SGWGSMGL----RYAERLQAALIPIINRFDCVNSSQIYSSMSRSA-------FCAGYLEGGIDSC 894

  Fly   271 TADSGGPLIQQCCEEHFEQANIVIGIVSWGKMPCGQKNAPSVFVRVSAFTEWINQVIS 328
            ..|||||.  .|..|  :.|.::.|::|||. .|.||..|.::..|:.:..||:.:|:
 Worm   895 QGDSGGPF--ACRRE--DGAFVLAGVISWGD-GCAQKKQPGIYTMVAPYLSWISAIIN 947

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7142NP_650703.1 Tryp_SPc 84..326 CDD:238113 70/249 (28%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SR 599..681 CDD:214555
Tryp_SPc 713..945 CDD:238113 70/249 (28%)
Blue background indicates that the domain is not in the aligned region.

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