DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7142 and gzma

DIOPT Version :10

Sequence 1:NP_650703.1 Gene:CG7142 / 42194 FlyBaseID:FBgn0038595 Length:334 Species:Drosophila melanogaster
Sequence 2:XP_012808240.1 Gene:gzma / 100135014 XenbaseID:XB-GENE-482759 Length:267 Species:Xenopus tropicalis


Alignment Length:256 Identity:77/256 - (30%)
Similarity:114/256 - (44%) Gaps:37/256 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 REATPHSAPYVVSIQMMTPDQGLVHYCAGTIINEHWILTAAHCLSSPQAVENSVIVAGSHDIHDQ 148
            |||..||.||:..|...|..      |.||:|.::|:||||||:     |.||.::.|:|.:..:
 Frog    39 REAASHSRPYMAYIYSRTGS------CGGTLIKQNWVLTAAHCV-----VNNSEVILGAHKVKSR 92

  Fly   149 KGEASNIQMRHIDYYVRHELYLGGVNPYDIALIYTKEPLVFDTYVQPATLP--EQDAQPEGYGTL 211
            :.|.....:...   :.|..:......:||.|:..|.....:.:|....||  :.|.:|....:.
 Frog    93 ENEQQRFSVARA---IPHPCFEWKKKIHDIQLLQIKGAAKLNKFVSVLKLPTTDMDVKPGSSCST 154

  Fly   212 YGWGNVSMTAVPN--YPHR-LQEANMPILDMELCEQILARSGLPLHETNLCTG-PLTGG--VSIC 270
            .|||    ...||  .|.. |:|.|:.::|...|.:|..:....:....||.| |....  ...|
 Frog   155 AGWG----VTKPNGKTPSDVLREVNVTVVDRGTCNKIYKKFKTEISTNMLCAGAPKKSDKKYDAC 215

  Fly   271 TADSGGPLIQQCCEEHFEQANIVIGIVSWGKMPCGQKNAPSVFVRVSA-FTEWINQVISTA 330
            ..|||||||   |.:.|.      ||||:|| .||....|.::.|::| :.:||..|...|
 Frog   216 QGDSGGPLI---CGKEFS------GIVSFGK-KCGDPKYPGIYTRLTARYLQWIRDVTGGA 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7142NP_650703.1 Tryp_SPc 84..326 CDD:238113 75/250 (30%)
gzmaXP_012808240.1 Tryp_SPc 35..262 CDD:238113 75/250 (30%)

Return to query results.
Submit another query.