DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18599 and HB-12

DIOPT Version :10

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_191748.1 Gene:HB-12 / 825362 AraportID:AT3G61890 Length:235 Species:Arabidopsis thaliana


Alignment Length:229 Identity:45/229 - (19%)
Similarity:85/229 - (37%) Gaps:76/229 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 LSFQREKLKSDSHKKSALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVK 361
            ::..::|:|..:::|.          |:.||::.||..||.:..:...:::.:|..|.|...||.
plant    18 MTMNKKKMKKSNNQKR----------FSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVA 72

  Fly   362 VWFQNRRIKWRKHHLE-------------------LTQQRLALIRQTQLPGTSL----------- 396
            :||||:|.:|:...||                   :.:::.:|:.:.|.....:           
plant    73 IWFQNKRARWKTKQLEKEYNTLRANYNNLASQFEIMKKEKQSLVSELQRLNEEMQRPKEEKHHEC 137

  Fly   397 LGNQVSVSANAAHSVSTERTNGCSAASPSLQEED-------------------NEDSKHSLSLSG 442
            .|:|     ..|.|.|||..||.|.....|.:..                   .|::.|.|    
plant   138 CGDQ-----GLALSSSTESHNGKSEPEGRLDQGSVLCNDGDYNNNIKTEYFGFEEETDHEL---- 193

  Fly   443 ALPPLSRAQSESDLSICND----SLDGDSLMDGS 472
                ::..:...|..:.:.    ..:.|||:|.|
plant   194 ----MNIVEKADDSCLTSSENWGGFNSDSLLDQS 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeodomain 317..373 CDD:459649 18/55 (33%)
HB-12NP_191748.1 Homeodomain 33..83 CDD:459649 17/59 (29%)
HALZ 85..126 CDD:460477 4/40 (10%)

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