DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18599 and HB20

DIOPT Version :9

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_186771.1 Gene:HB20 / 821232 AraportID:AT3G01220 Length:286 Species:Arabidopsis thaliana


Alignment Length:232 Identity:53/232 - (22%)
Similarity:85/232 - (36%) Gaps:60/232 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   278 ALQSLQQLHQQHHAQQQATLSFQREKLKSD-SHKKSALKNKRVRTIFTPEQLECLEAEFERQQYM 341
            :|.::|:.|.|         :...|.|..| :|.....|.||::.    ||::.||..||....:
plant    58 SLMNVQEDHNQ---------TLDEENLSDDGAHTMLGEKKKRLQL----EQVKALEKSFELGNKL 109

  Fly   342 VGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHHLELTQQRL-ALIRQTQLPGTSLL-------- 397
            ....::.||..|.:...|:.:||||||.:|:...||.....| ......:....|||        
plant   110 EPERKIQLAKALGMQPRQIAIWFQNRRARWKTRQLERDYDSLKKQFESLKSDNASLLAYNKKLLA 174

  Fly   398 ------------GNQVSVSANAAHSVSTERTNGCSAASPSLQEEDNED--SKHSLSLSGALPPLS 448
                        ||.|...|.|:.|     .||.:..|..:..|...:  :.|..::....|...
plant   175 EVMALKNKECNEGNIVKREAEASWS-----NNGSTENSSDINLEMPRETITTHVNTIKDLFPSSI 234

  Fly   449 RAQSESD-----------LSICNDSLDGDSLMDGSEE 474
            |:.:..|           .|:||       :.:|.:|
plant   235 RSSAHDDDHHQNHEIVQEESLCN-------MFNGIDE 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeobox 320..372 CDD:278475 16/51 (31%)
HB20NP_186771.1 HOX 87..140 CDD:197696 19/56 (34%)
HALZ 142..183 CDD:280364 6/40 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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