DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18599 and HB6

DIOPT Version :10

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_565536.1 Gene:HB6 / 816775 AraportID:AT2G22430 Length:311 Species:Arabidopsis thaliana


Alignment Length:248 Identity:55/248 - (22%)
Similarity:96/248 - (38%) Gaps:45/248 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 AVAAAVGAAPSALQSLQQLHQQHHAQQQATLSFQREK----LKSDSHKKSALKNKRVRTIFTPEQ 327
            :|...:...|:.....|...:....:.|:.|....|:    ::...|...:.|.:|:    :..|
plant    10 SVGGLISLCPTTSTDEQSPRRYGGREFQSMLEGYEEEEEAIVEERGHVGLSEKKRRL----SINQ 70

  Fly   328 LECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHHLE--------------- 377
            ::.||..||.:..:....::.||..|.|...||.|||||||.:|:...||               
plant    71 VKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKTQYDSLRH 135

  Fly   378 ----LTQQRLALIRQTQLPGTSLLG---------NQVSVSANAAHSVSTER-------TNGCSAA 422
                |.:...:|:::.....|.|.|         |..:|:..:..||..|.       |...|:.
plant   136 NFDSLRRDNESLLQEISKLKTKLNGGGGEEEEEENNAAVTTESDISVKEEEVSLPEKITEAPSSP 200

  Fly   423 SPSLQEEDNEDSKHSLSLSGALPPLSRAQSESDLSICNDSLDGDSLMDGSEEA 475
            ...|:..|..:.:....|...||..:.|.|.:..:..:||.|..:|:  :||:
plant   201 PQFLEHSDGLNYRSFTDLRDLLPLKAAASSFAAAAGSSDSSDSSALL--NEES 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeodomain 317..373 CDD:459649 20/55 (36%)
HB6NP_565536.1 Homeodomain 62..115 CDD:459649 20/56 (36%)
HALZ 117..158 CDD:460477 5/40 (13%)

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