DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18599 and lbx1b

DIOPT Version :10

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001156784.1 Gene:lbx1b / 793810 ZFINID:ZDB-GENE-050309-27 Length:265 Species:Danio rerio


Alignment Length:210 Identity:63/210 - (30%)
Similarity:86/210 - (40%) Gaps:44/210 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   277 SALQSLQQLHQQHHAQQQATLSFQ------------REKLKSDSHKKSALKNKRVRTIFTPEQLE 329
            |.|.:||:|         |:.:|:            ::.||....:.|..|.::.||.||..||.
Zfish    79 SPLCALQEL---------ASKTFKGLELGVLQAAEGKDGLKLFGQRDSPKKRRKSRTAFTNHQLY 134

  Fly   330 CLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHHLELTQQRLALIRQTQLPGT 394
            .||..|..|:|:...:|..:||.|.||.|||..||||||.| .|..||..:..:..:|.|.|...
Zfish   135 ELEKRFLHQKYLSPADRDQIAHQLGLTNAQVITWFQNRRAK-LKRDLEEMKADVESVRSTGLVPL 198

  Fly   395 SLLGNQVSVSANAAHSVSTERTNGCSAASPSLQEEDNEDSKHSLSLSGALPPLSRAQSESDLSIC 459
            ..|.....:...||...:......|   ||.|..|  ..:.|.|.||    |:|           
Zfish   199 DKLAKLADLERCAAAGATGNPGPQC---SPRLGHE--YKTVHKLCLS----PMS----------- 243

  Fly   460 NDSLDGDSLMDGSEE 474
              ||...:..|.||:
Zfish   244 --SLSDHTSQDCSED 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeodomain 317..373 CDD:459649 27/55 (49%)
lbx1bNP_001156784.1 Homeodomain 122..178 CDD:459649 27/56 (48%)

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