DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18599 and hmx3

DIOPT Version :10

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001072829.1 Gene:hmx3 / 780290 XenbaseID:XB-GENE-483776 Length:306 Species:Xenopus tropicalis


Alignment Length:188 Identity:51/188 - (27%)
Similarity:84/188 - (44%) Gaps:31/188 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   252 HGGH------------------------QHPHPHQAGFAAVAAAVGAAPSALQSLQQLHQQHHAQ 292
            ||||                        ..|.|    ...:.|.:.|..|..:|.:::..:....
 Frog    92 HGGHTPRTEVPDKSLLLGPTSPVSGGERDSPEP----IHPLKAELEAKDSESKSPEEIILEESEP 152

  Fly   293 QQATLSFQRE--KLKSDSHKKSALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKL 355
            ::.......|  |.:.:|..|...:.|:.||:|:..|:..||:.|:.::|:...||..||.:|.|
 Frog   153 EEGKKDDSGEDWKKREESPDKKPCRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHL 217

  Fly   356 TEAQVKVWFQNRRIKWRKH-HLELTQQRLALIRQTQLPGTSLLGNQVSVSANAAHSVS 412
            ||.|||:||||||.||::. ..||....|:.....::....:|.::.|.||.:|.|.:
 Frog   218 TETQVKIWFQNRRNKWKRQLAAELEAANLSHAAAQRIVRVPILYHENSSSAESASSAA 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeodomain 317..373 CDD:459649 28/55 (51%)
hmx3NP_001072829.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 95..181 12/89 (13%)
Homeodomain 179..235 CDD:459649 28/55 (51%)

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