DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18599 and Tlx2

DIOPT Version :10

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001165596.1 Gene:Tlx2 / 680117 RGDID:1595506 Length:284 Species:Rattus norvegicus


Alignment Length:151 Identity:51/151 - (33%)
Similarity:72/151 - (47%) Gaps:16/151 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   258 PHPHQAGFA-AVAAAVG-AAPSALQSLQ---QLHQQHHAQQQATLSFQ----REKLKSDSHKKSA 313
            |.|..:|.| |||...| ..|..|..|.   ....:..|:.:.|.:..    ..::......::.
  Rat    90 PVPPPSGAAPAVAGPSGLGGPGGLAGLTFPWMDSGRRFAKDRLTAALSPFSGTRRIGHPYQNRTP 154

  Fly   314 LKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHHLEL 378
            .|.|:.||.|:..|:..||..|.||:|:...||..||..|::|:||||.||||||.|||:...|.
  Rat   155 PKRKKPRTSFSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQTAEE 219

  Fly   379 TQQ------RLAL-IRQTQLP 392
            .:.      ||.| ::|..||
  Rat   220 REAERHRAGRLLLHLQQDALP 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeodomain 317..373 CDD:459649 29/55 (53%)
Tlx2NP_001165596.1 Homeodomain 158..214 CDD:459649 29/55 (53%)

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