DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18599 and Nkx1-1

DIOPT Version :10

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_035450.1 Gene:Nkx1-1 / 672284 MGIID:109346 Length:440 Species:Mus musculus


Alignment Length:339 Identity:83/339 - (24%)
Similarity:117/339 - (34%) Gaps:102/339 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 SSSHNSNSNHREQLAAAAATATSHAQLIEAAAAHSSLDVGKSFTIAAILGLQSQRKDYNNAINLS 193
            ::|..|.....|:.|.:|||.      :.|||.......|.|:           |.|...|...|
Mouse   125 AASGRSPRAELERRALSAATG------VAAAAGAEPTSAGDSY-----------RADEAEANGYS 172

  Fly   194 LHDNNNIIGDDNNKC----------------YTSNPNNNNNN---NNNGGSNSGNNNSSPSVNNF 239
            .....:...|..::.                .|..|...:..   ..:|...:....:|| |::.
Mouse   173 SGSGRSPTADSEDEAPEDEDEEEAPEVQDAQGTEEPRGGSGGLGARGSGCPGAAEVEASP-VDDT 236

  Fly   240 NCDSVAGNGRYLHGGHQHPHPHQAGFAAVAAAVGAAPSALQSLQQLHQQHHAQQQATLSFQREKL 304
            ......||.           |...|..|.|...|:|.|             ..|.|.::.:.::.
Mouse   237 AAPGPRGNS-----------PGAPGPPATATGAGSAGS-------------TPQGAAVTTKPKRK 277

  Fly   305 KSDSHKKSALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRI 369
            ::.|..||. |.:|.||.||.|||..||.:|:..:|:...|||.||.:|.|||.|||:||||||.
Mouse   278 RTGSDSKSG-KPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRT 341

  Fly   370 KWRKHHLELTQQRLALIRQTQLPGTSLLGNQVSVSANAAHSVSTERTNGCSAASPSLQEEDNEDS 434
            ||:|                |.||..                ::..|.|.....|.        :
Mouse   342 KWKK----------------QNPGAD----------------TSAPTGGGGGPGPG--------A 366

  Fly   435 KHSLSLSGALPPLS 448
            .....|.|.|.|||
Mouse   367 GPGAGLPGGLSPLS 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeodomain 317..373 CDD:459649 32/55 (58%)
Nkx1-1NP_035450.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..82
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..291 31/188 (16%)
Homeodomain 289..345 CDD:459649 32/55 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 342..387 15/79 (19%)
Blue background indicates that the domain is not in the aligned region.

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