Protein Alignment CG18599 and Vax1

DIOPT Version :10

• Sequence 1: NP_650701.1
• Gene: CG18599 / 42191
• FlyBaseID: FBgn0038592
• Length: 475
• Species: Drosophila melanogaster
• Sequence 2: NP_072158.1
• Gene: Vax1 / 64571
• RGDID: 621132
• Length: 336
• Species: Rattus norvegicus
• Alignment Length: 234
• Identity: 69/234 - (29%)
• Similarity: 97/234 - (41%)
• Gaps: 65/234 - (27%)

  Fly   268 VAAAVGAAPSALQSLQQLHQQHHAQQQATLSFQREKLKSDS-------------HKKSALKN--- 316
            :..|.|:.|:|.     |.:...|...:..|....|.||:|             ..|.:::.
  Rat    32 IKGAEGSLPAAF-----LKEPQGAFSASGASEDCNKSKSNSSADPDYCRRILVRDAKGSIREIIL 91

  Fly   317 ---------KRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWR 372
                     ||.||.||.|||..||.||:|.||:||.||..||..|.|:|.||||||||||.|.:
  Rat    92 PKGLDLDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQK 156

  Fly   373 KHHLELTQQR------------LALIRQTQL---PG---------TSLLGNQV------SVSANA 407
            |...:.::.|            |.|:.|.:|   ||         |..||:.:      ::.|.|
  Rat   157 KDQGKDSELRSVVSETAATCSVLRLLEQGRLLSPPGLPALLPPCATGALGSALRGPSLPALGAGA 221

  Fly   408 AHSVSTERTNGCSAASPSLQEEDNEDSKHSLSLSGALPP 446
            |...:.......:|..|:     ...|:|..::.||..|
  Rat   222 AAGSAAAAAAAATAPGPA-----GAASQHPPAVGGAPGP 255

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG18599	NP_650701.1	Homeodomain	317..373	CDD:459649	36/55 (65%)
Vax1	NP_072158.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..39		2/6 (33%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	50..69		6/18 (33%)
		vax upstream domain	72..99		1/26 (4%)
		homeobox	100..159		37/58 (64%)
		Homeodomain	101..157	CDD:459649	36/55 (65%)
		vax downstream domain	178..189		4/10 (40%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	236..267		6/25 (24%)
		vax terminal domain	315..323