DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18599 and dlx3

DIOPT Version :10

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001025566.1 Gene:dlx3 / 594954 XenbaseID:XB-GENE-5879293 Length:276 Species:Xenopus tropicalis


Alignment Length:233 Identity:62/233 - (26%)
Similarity:97/233 - (41%) Gaps:68/233 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 SPSVNNFNCDSVAGNGRYLHGGHQHPHPHQAGFAAVAAAVGAAPSALQSLQQLHQQ--------H 289
            |||::::              |:.||| ||..|..:.......|      :..:|.        |
 Frog    58 SPSISSY--------------GYHHPH-HQYNFNGLVGNESFLP------KDDYQYGGGYRAFGH 101

  Fly   290 HAQQQA--TLSFQRE-----KLKSDSHKKSALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERL 347
            :.:...  |:|.:.|     ::.:...||.    ::.|||::..||..|:..|::.||:..|||.
 Frog   102 YREPPVPETVSVKEEPETEVRMVNGKPKKI----RKPRTIYSSYQLAALQRRFQKAQYLALPERA 162

  Fly   348 YLAHTLKLTEAQVKVWFQNRRIKWRKHHLELTQQRLALIRQTQLPGTSLLGNQVSVSANAAHSVS 412
            .||..|.||:.|||:||||||.|::|           |.:..:.||..             ||.:
 Frog   163 ELAAQLGLTQTQVKIWFQNRRSKFKK-----------LYKTGEGPGLE-------------HSPN 203

  Fly   413 TERTNGC-SAASPSLQEEDNEDSK-HSLSLSGALPPLS 448
            ...:..| |.:||.:.  ||..|: .......:|||.|
 Frog   204 NSDSMACNSPSSPPVW--DNSRSRTPQQQQQQSLPPCS 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeodomain 317..373 CDD:459649 27/55 (49%)
dlx3NP_001025566.1 DLL_N 24..110 CDD:463567 13/72 (18%)
COG5576 109..227 CDD:227863 45/147 (31%)
Homeodomain 132..188 CDD:459649 27/55 (49%)

Return to query results.
Submit another query.