Protein Alignment CG18599 and msx2a

DIOPT Version :10

• Sequence 1: NP_650701.1
• Gene: CG18599 / 42191
• FlyBaseID: FBgn0038592
• Length: 475
• Species: Drosophila melanogaster
• Sequence 2: NP_001025440.1
• Gene: msx2a / 573620
• ZFINID: ZDB-GENE-980526-322
• Length: 257
• Species: Danio rerio
• Alignment Length: 358
• Identity: 75/358 - (20%)
• Similarity: 123/358 - (34%)
• Gaps: 123/358 - (34%)

  Fly   116 TGNNNNNSSSSSNSSSHNSNSNHREQLAAAAATATSHAQLIEAAAAHSSLDVGKSFTIAAILGLQ 180
            :.|:.:..||..:...|.|.|...:.|                           .|::.|::..:
Zfish    15 SANHKSKVSSDEDDDDHGSRSVRTQSL---------------------------PFSVDALMSTK 52

  Fly   181 SQRKDYNNAINLSLHDNNNIIGDDNNKCYTSNPNNNNNNNNNGGSNSGNNNSSPSVN-NFNCDSV 244
            .:.:..:..   |:| ...||..|:...|                       |.||: ...|:|.
Zfish    53 ERSESTSRG---SIH-MTRIINQDDRSIY-----------------------SDSVDFTKRCESA 90

  Fly   245 AGNGRYLHGGHQHPHPHQAGFAAVAAAVGAAPSALQSLQQLHQQHHAQQQATLSFQREKLKSDSH 309
            ..:..:::.......|.                              .|..|:...|:      |
Zfish    91 KEDSSWINKPRLSTSPR------------------------------SQSPTICPLRK------H 119

  Fly   310 KKSALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRK- 373
            |    .|::.||.||..||..||.:|.::||:...||...:.:|.|||.|||:||||||.|.::
Zfish   120 K----TNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRL 180

  Fly   374 HHLELTQQRLALIRQTQLPGTSL---LGNQVSVSANAAHSVSTERTNGCSAASPSLQEEDNEDSK 435
            ...||.:.::| .:....||.:|   |..|...:|..           |..:.|.        |:
Zfish   181 QEAELERFKMA-SKPILHPGLTLPFPLCTQPQTAALV-----------CGQSFPF--------SR 225

  Fly   436 HSLSLSGALPPLSRAQSESDLSICNDSLDGDSL 468
            |.|..:    |:....:....|:|:.|.||.|:
Zfish   226 HMLPFA----PIGIYSTPMGYSMCHLSKDGYSV 254

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG18599	NP_650701.1	Homeodomain	317..373	CDD:459649	27/55 (49%)
msx2a	NP_001025440.1	Homeodomain	123..179	CDD:459649	27/55 (49%)