DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18599 and urad

DIOPT Version :9

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001073641.1 Gene:urad / 557735 ZFINID:ZDB-GENE-070112-472 Length:174 Species:Danio rerio


Alignment Length:127 Identity:29/127 - (22%)
Similarity:49/127 - (38%) Gaps:36/127 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 GRYLHGGHQHPHPH----QAGFAAVAAAVGAAPSALQSLQQLHQQH-HAQQQATLSF-----QRE 302
            ||.|..|...|...    |||.           :.|.|.:.:|... :::.:....|     .|.
Zfish    72 GRDLQSGTLTPESQEEQSQAGM-----------TTLDSAEIVHMYRLNSEYKERFGFPFVICARL 125

  Fly   303 KLKSDSHKK--SALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKV 362
            ..|:|..::  ..|||:|.      .:|||...|.::    :...||   |::.|::.|.|:
Zfish   126 NNKADIVRQLSERLKNRRT------AELECAIEEVKK----ICSLRL---HSIVLSDIQTKL 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeobox 320..372 CDD:278475 10/43 (23%)
uradNP_001073641.1 OHCU_decarbox 7..162 CDD:401335 23/110 (21%)
Substrate binding 84..88 0/3 (0%)
Substrate binding 119..123 0/3 (0%)
Microbody targeting signal. /evidence=ECO:0000255 172..174 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.