DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18599 and hmx2

DIOPT Version :10

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001108570.3 Gene:hmx2 / 555632 ZFINID:ZDB-GENE-080506-2 Length:269 Species:Danio rerio


Alignment Length:246 Identity:72/246 - (29%)
Similarity:107/246 - (43%) Gaps:42/246 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 SFTIAAIL-----GLQSQRKD------YNNAINLSLHDNNNIIGDDNNKCYTSNPNNNNNNNNNG 223
            ||||.:||     |::|..||      ....:::|..|:.: .|:|:..||.|.|          
Zfish    18 SFTIQSILGTSNDGVRSAGKDSPKSQPRKRTLSVSSEDDCS-AGEDSGDCYCSEP---------- 71

  Fly   224 GSNSGNNNSSPSVNNFNCDSVAGNGRYLHGGHQHPHPHQAGFAAVAAAVGAAPSALQSLQQLHQQ 288
            |.....|...|.  ||...:..|......|..:.||              ..||.|...:: .|.
Zfish    72 GVPESCNPHQPL--NFCLGATKGLLPVQDGIDRRPH--------------LTPSILPDYKE-EQG 119

  Fly   289 HHAQQQATLSFQREKLKSDSHKKSALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTL 353
            ....|.:.:|..|::...|....||  .|:.||:|:..|:..||:.|:.::|:...||..||.:|
Zfish   120 RACSQMSPVSEDRQRDGPDKQNNSA--KKKTRTVFSRSQVYQLESTFDMKRYLSSSERACLASSL 182

  Fly   354 KLTEAQVKVWFQNRRIKWRKH-HLELTQQRLALIRQTQLPGTSLLGNQVSV 403
            :|||.|||.||||||.||::. ..||....:|......|.|..|:..:.|:
Zfish   183 QLTETQVKTWFQNRRNKWKRQLSAELEAANMAHASAQTLVGMPLVFRENSL 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeodomain 317..373 CDD:459649 28/55 (51%)
hmx2NP_001108570.3 Homeodomain 146..202 CDD:459649 28/55 (51%)

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