DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18599 and hoxd1

DIOPT Version :10

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001016678.1 Gene:hoxd1 / 549432 XenbaseID:XB-GENE-482731 Length:301 Species:Xenopus tropicalis


Alignment Length:58 Identity:17/58 - (29%)
Similarity:21/58 - (36%) Gaps:10/58 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 SPFNQIATLPPWCQCEPIRPKCPPGPPGPPGCRGEPGPSG----LPGRRGINNYETLP 141
            |..||..|..|  :.|..:.|..|....|    .:.||.|    ||.....|:.|..|
 Frog   121 SAVNQKPTNLP--KVEESQQKNTPPTDSP----SKAGPRGSVQYLPDLDDKNSQEKGP 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeodomain 317..373 CDD:459649
hoxd1NP_001016678.1 Antp-type hexapeptide. /evidence=ECO:0000255 178..183
Homeodomain 207..260 CDD:459649
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 255..301
Blue background indicates that the domain is not in the aligned region.

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