Protein Alignment CG18599 and nkx3.3

DIOPT Version :10

• Sequence 1: NP_650701.1
• Gene: CG18599 / 42191
• FlyBaseID: FBgn0038592
• Length: 475
• Species: Drosophila melanogaster
• Sequence 2: NP_001013342.2
• Gene: nkx3.3 / 503746
• ZFINID: ZDB-GENE-050306-27
• Length: 240
• Species: Danio rerio
• Alignment Length: 304
• Identity: 79/304 - (25%)
• Similarity: 121/304 - (39%)
• Gaps: 87/304 - (28%)

  Fly   187 NNAINLSLHDNNNIIGDDNNKCYTSNPNNNNNNNNNGGSNSGNNNSSPSVNNFNCDSVAGNGRYL 251
            ||..:.|:|   ||:    |:.:....|.:.:....|...:.::.||..||.
Zfish     3 NNRTSFSIH---NIL----NQGHECGKNGSFDEEYEGEKRTQDSGSSVPVNR------------- 47

  Fly   252 HGGHQHPHPHQAGFAAVAAAVGAAPSALQSLQQLHQQHHAQQQAT---LSFQR--------EKLK 305
                        |..:....:.:....|:||..  .||..::::|   .|.:|        :|.:
Zfish    48 ------------GAESAQTRISSCVLVLESLSS--DQHSCEEESTGEDNSLERRHDHEMDQQKPQ 98

  Fly   306 S----DSHKKSALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQN 366
            |    ||:.||:  .||.|..|:..|:..||..|..|:|:.||||..||..|||||.|||:||||
Zfish    99 SCSFEDSNPKSS--KKRSRAAFSHAQVYELERRFNLQRYLSGPERADLAGALKLTETQVKIWFQN 161

  Fly   367 RRIKWRKHHLELTQQRLALIRQTQLPGTSLLGNQVSVSA---NAAHSVSTERTNGCSAASPSLQE 428
            ||.|.::      :|..|.:..|.   |:.|..:|:|..   |.....:||     ...|||
Zfish   162 RRYKTKR------RQMAAELATTP---TTTLAKRVAVKVLVRNDQRQYNTE-----DLPSPS--- 209

  Fly   429 EDNEDSKHSLSLSGALPPLSRAQSESDLSIC-NDSLDGDSLMDG 471
                           :|||.::........| ...:.|::|..|
Zfish   210 ---------------VPPLYQSFPYYPYMFCFQPWISGNTLSGG 238

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG18599	NP_650701.1	Homeodomain	317..373	CDD:459649	31/55 (56%)
nkx3.3	NP_001013342.2	Homeodomain	112..168	CDD:459649	31/55 (56%)