DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18599 and Dr

DIOPT Version :9

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_477324.1 Gene:Dr / 45285 FlyBaseID:FBgn0000492 Length:515 Species:Drosophila melanogaster


Alignment Length:476 Identity:117/476 - (24%)
Similarity:178/476 - (37%) Gaps:132/476 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 TQASGGGSGGGSSVAGLGGLGGGIHAHGQPHHAALAAAAAAAVAVSAGQSSYQMEHQQQHHQLQQ 86
            :.:|..||..||:::. |.:......:..|.|.|...|.|:..:.||...::|....|||.|.||
  Fly    38 SSSSNSGSNSGSNMSS-GNMTSSNLTNLSPSHPAGLNALASPTSPSALLLAHQQHLLQQHQQHQQ 101

  Fly    87 QQQQQQHHHHQQLHTHHQDGHHPH-------------------PPTP----TTGNNNNNSSSSSN 128
            ||||||.....||...|...||.|                   |.||    ..|..|..||::::
  Fly   102 QQQQQQQAAALQLAAVHPPAHHLHKTTSRLSNFSVASLLADTRPRTPPNQAADGPQNLTSSAATS 166

  Fly   129 SSSHNSNSNHREQLAAAA---------ATATSHAQLIE----AAAAHSSLDVGKSFTIAAILGLQ 180
            ..|..|::......:|||         |....||.|::    |||||:     :...:||.|..|
  Fly   167 PISQASSTPPPPPASAAAQVPANTFHPAAVAHHAHLLQAAHAAAAAHA-----QHQAMAAQLRQQ 226

  Fly   181 SQRKDYN-NAINLSLHDN------NNIIGDDNNKCYTSNPNNNNNNNNNG--------------- 223
            .|:.|.. |:...|....      .:.:|...|  ..|.|..|..::..|               
  Fly   227 QQQADARANSPPASTSSTPSSTPLGSALGSQGN--VASTPAKNERHSPLGSHTDSELEYDEEMLQ 289

  Fly   224 ---GSNSGNNNSSPSVNNFNC--------DSVAGNGRYLHGGHQHP---HPHQAGFAAVAAAVGA 274
               ..:....:|...:.:.|.        |.:.|:|:.|...|..|   |......:..|.|.|.
  Fly   290 DHEADHDEEEDSIVDIEDMNADDSPRSTPDGLDGSGKSLESPHGPPPGSHMQSTILSPAALASGH 354

  Fly   275 AP------SALQSLQQLHQQHHAQQQATLS------------------------FQREKLKSDSH 309
            .|      |||.:             |.::                        |.......|::
  Fly   355 VPIRPTPFSALAA-------------AAVAWTGMGGGVPWPGTRQMPPFGPPGMFPGAGFGGDAN 406

  Fly   310 KKSALK--------NKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQN 366
            :...:|        |::.||.||.:||..||.:|..:||:...||...:.:|:|||.|||:||||
  Fly   407 EPPRIKCNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLRLTETQVKIWFQN 471

  Fly   367 RRIKWRK-HHLELTQQRLALI 386
            ||.|.:: ...|:.:.::|.:
  Fly   472 RRAKAKRLQEAEIEKIKMAAL 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeobox 320..372 CDD:278475 27/51 (53%)
DrNP_477324.1 Homeobox 424..477 CDD:278475 27/52 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 45 1.000 Domainoid score I3555
eggNOG 1 0.900 - - E1_KOG0850
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D858478at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.820

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