DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18599 and MSX2

DIOPT Version :9

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_002440.2 Gene:MSX2 / 4488 HGNCID:7392 Length:267 Species:Homo sapiens


Alignment Length:242 Identity:66/242 - (27%)
Similarity:94/242 - (38%) Gaps:75/242 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 SSPSVNN--FNCDS-----VAGNGRYLHGGHQHPHPHQAGFAA-------------VAAAVG--- 273
            :|||..|  |:.|.     |||.|         |.|..|..||             |.|.:.   
Human     2 ASPSKGNDLFSPDEEGPAVVAGPG---------PGPGGAEGAAEERRVKVSSLPFSVEALMSDKK 57

  Fly   274 ----AAP------SALQSLQQLHQQHHAQQQA------TLSFQREKLKSDSHKKSAL-------- 314
                |:|      ||..:|:.|....|..::|      ...|:...:||::.:..|.        
Human    58 PPKEASPLPAESASAGATLRPLLLSGHGAREAHSPGPLVKPFETASVKSENSEDGAAWMQEPGRY 122

  Fly   315 ------------------KNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVK 361
                              .|::.||.||..||..||.:|.::||:...||...:.:|.|||.|||
Human   123 SPPPRHMSPTTCTLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVK 187

  Fly   362 VWFQNRRIKWRKHHLELTQQRLALIRQTQLPGTSLLGNQVSVSANAA 408
            :||||||.| .|...|...::|.:..:..||.:..|...:|....||
Human   188 IWFQNRRAK-AKRLQEAELEKLKMAAKPMLPSSFSLPFPISSPLQAA 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeobox 320..372 CDD:278475 27/51 (53%)
MSX2NP_002440.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..71 19/77 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..147 1/30 (3%)
Homeobox 145..199 CDD:365835 27/54 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.