DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18599 and nkx6.1

DIOPT Version :9

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001002475.1 Gene:nkx6.1 / 436748 ZFINID:ZDB-GENE-040718-178 Length:312 Species:Danio rerio


Alignment Length:218 Identity:67/218 - (30%)
Similarity:90/218 - (41%) Gaps:56/218 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 SSPSVNNFNCDSVAGNGRYLHGGHQHPHPHQAGFAAVAAAVGAA--PSALQSL--------QQLH 286
            |.|||.......::|..|:  .....|.|....|:..||||..|  |..|..|        ..:.
Zfish    97 SRPSVACSPAGILSGLPRF--SSLSPPPPPGLYFSPSAAAVAVARYPKPLTELPGRTPIFWPGVM 159

  Fly   287 QQHHAQQQATLSFQREKLKSDSHKKSAL-----KNKRVRTIFTPEQLECLEAEFERQQYMVGPER 346
            |..|        ::..:.....|:.|.|     |.|..|..|:.:|:..||..||:.:|:.||||
Zfish   160 QSPH--------WRDARFACSPHQNSVLLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPER 216

  Fly   347 LYLAHTLKLTEAQVKVWFQNRRIKWRKHH-LELTQQRLALIRQTQLPGTSLLGNQVSVSANAAHS 410
            ..||::|.:||:||||||||||.||||.| .|:                        .||.....
Zfish   217 ARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM------------------------ASAKKKQD 257

  Fly   411 VSTERTNGCSAASPSLQEEDNED 433
            ..|||..|.|      :.||::|
Zfish   258 SETERLKGAS------ENEDDDD 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeobox 320..372 CDD:278475 28/51 (55%)
nkx6.1NP_001002475.1 Homeobox 189..242 CDD:278475 28/52 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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