Protein Alignment CG18599 and ro

DIOPT Version :10

• Sequence 1: NP_650701.1
• Gene: CG18599 / 42191
• FlyBaseID: FBgn0038592
• Length: 475
• Species: Drosophila melanogaster
• Sequence 2: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Alignment Length: 467
• Identity: 94/467 - (20%)
• Similarity: 135/467 - (28%)
• Gaps: 212/467 - (45%)

  Fly     3 QNPSKYHANPLSHFLALH---NTQASGGGSGGGSSVAGLGGLGGGIHAH-----GQPHHAALAAA 59
            |.||    :|...|..|:   .|::|..|.           :..|.|||     ..|:|:...:.
  Fly    36 QRPS----SPRQFFERLYGHLETRSSENGE-----------IDVGTHAHKPPPCDTPYHSDGGSV 85

  Fly    60 AAAAVAVS------AGQSSYQMEHQQQHHQLQQQQQQQQHHHHQQLHTHHQDGHHPHPPTPTTGN 118
            ::..:::|      |...:|......:.:.....||.||||||          || |||
  Fly    86 SSPDISISDERTSLAAYPAYDFYGHAKDYPQHPSQQHQQHHHH----------HH-HPP------ 133

  Fly   119 NNNNSSSSSNSSSHNSNSNHREQLAAAAATATSHAQLIEAAAAHSSLD-VGKSFTIAAILGLQSQ 182
                                               ||:     |..|. |.....|||
  Fly   134 -----------------------------------QLV-----HQKLSYVSPPPAIAA------- 151

  Fly   183 RKDYNNAINLSLHDNNNIIGDDNNKCYTSNPNNNNNNNNNGGSNSGNNNSSPSVNNFNCDSVAGN 247
                                                   .|.:|....::.|:
  Fly   152 ---------------------------------------GGAANPVLPHAFPA------------ 165

  Fly   248 GRYLHGGHQHPHPHQAGFAAVAAAVGAAPSALQSLQQLHQQHHAQQQATLSFQREKLKSDSHKKS 312
                 |....|| ..|||:|..|                              |.:.|..
  Fly   166 -----GFPSDPH-FSAGFSAFLA------------------------------RRRRKEG----- 189

  Fly   313 ALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHHLE 377
              :.:|.||.|:.||...||.||.|.:|:....|..||.||:|||.|:|:||||||.|.::....
  Fly   190 --RQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQNRRAKDKRIEKA 252

  Fly   378 LTQQR--------------LALIRQTQLPGTSLLGNQVSVSANAAHSVSTERTNGCSAASPSLQE 428
            ...|.              :.....|..||....|..|.|..|..          .:||:|:...
  Fly   253 QIDQHYRNFVVANGFMSSIMGQAATTMPPGGVTGGVAVGVGLNYY----------AAAATPAALP 307

  Fly   429 EDNEDSKHSLSL 440
            :||....:.:.:
  Fly   308 KDNTQDANFIDI 319

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG18599	NP_650701.1	Homeodomain	317..373	CDD:459649	29/55 (53%)
ro	NP_524521.1	Homeodomain	196..248	CDD:459649	27/51 (53%)