DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18599 and C15

DIOPT Version :10

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster


Alignment Length:368 Identity:89/368 - (24%)
Similarity:145/368 - (39%) Gaps:71/368 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 QQQHHHHQQLHTHHQDGHHPHPPTPTTGNNNNNSSSSSNSSSHNSNSNHREQLAAAAATATSHAQ 154
            ::..|.|:..|....:....|   ....:::..|..|.:....:..|.:.|       :.|..::
  Fly     5 EEDDHEHENEHGEEVEEQEIH---VDVDSDSRMSCGSGSDVDMDGGSCYDE-------SETPLSE 59

  Fly   155 LIEAAAAHSSLDVGKSFTIAAILGLQSQRKDYNNAINLSLHDNNNIIGDDNNKCYTSNPNNNNNN 219
            .:::....||......|:|:.:|         :.....|.|.:||     ||...:|:|.:::||
  Fly    60 SLQSEQTRSSSSENLPFSISRLL---------SKPFETSHHHHNN-----NNHLLSSSPGSSSNN 110

  Fly   220 NNNGGSNSGNNNSSPSVNNFN-----CDSVAGNGRYLHGGHQHPHPHQAGFAAVAAAVGAAPSAL 279
            ||:|  ..|.........:.:     ..|:| |..|......:.:||....||....:...|...
  Fly   111 NNSG--EKGEEKELLQQEDHDLAYKLATSIA-NSTYGSAAALYSYPHLYPSAAGGHVLRVPPQRT 172

  Fly   280 QSLQQLHQQHHA-------QQQATLSFQ-REKLKSDSHKKSALKNKRVRTIFTPEQLECLEAEFE 336
            .....|...|||       :.:...:|. ..::......::..|.|:.||.||..|:..||..|.
  Fly   173 PLTWALPPLHHAALAHQAVKDRLAAAFPIARRIGHPYQNRTPPKRKKPRTSFTRIQVAELEKRFH 237

  Fly   337 RQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHHLELTQ------QRLALIRQTQ----- 390
            :|:|:...||..||..||:|:||||.||||||.|||:...|..:      .||.|..|.:     
  Fly   238 KQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQAANRLMLSLQAEAISKG 302

  Fly   391 -LPGTSLLGNQVSVS-------------ANAAHSVSTERTNGC 419
             .|.::.||:|..|:             |.|:|:.      ||
  Fly   303 FAPPSAPLGSQGGVNGAPLAALHGLQPWAEASHAA------GC 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeodomain 317..373 CDD:459649 30/55 (55%)
C15NP_476873.2 COG5576 <196..315 CDD:227863 42/118 (36%)
Homeodomain 218..274 CDD:459649 30/55 (55%)

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