Protein Alignment CG18599 and abd-A

DIOPT Version :10

• Sequence 1: NP_650701.1
• Gene: CG18599 / 42191
• FlyBaseID: FBgn0038592
• Length: 475
• Species: Drosophila melanogaster
• Sequence 2: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Alignment Length: 460
• Identity: 114/460 - (24%)
• Similarity: 168/460 - (36%)
• Gaps: 161/460 - (35%)

  Fly    11 NPLSHFLALHNTQASGGGSGGGSSVAGLG---GLGGG------IHAH-GQPHHAALAAAAAAAVA 65
            |..|:.:|..||..:...|...||.:...   .|.||      :..| ||..|:.:::::
  Fly    60 NNSSNTIAGSNTSNTNNSSSSPSSSSNNNSNLNLSGGSLSPSHLSQHLGQSPHSPVSSSS----- 119

  Fly    66 VSAGQSSYQMEHQQQHHQLQQQ---QQQQQHHHHQQLHTHHQ----------------------- 104
                      ..||.|.|:|||   .|||||.||||...|||
  Fly   120 ----------PFQQHHPQVQQQHLNHQQQQHLHHQQQQHHHQYSSLSAALQLQQQQHHISKLAAA 174

  Fly   105 --DGH-HPHP----PTPTTGNNNNNSSSSSNSSSHNSNSNHREQL------AAAAATATSHAQLI 156
              ..| |.|.    ..|:.||:....||.|.|.|.:.:|:....|      :|:|:.:.|.|..:
  Fly   175 AVASHGHAHQQLLLTPPSAGNSQAGDSSCSPSPSASGSSSLHRSLNDNSPGSASASASASAASSV 239

  Fly   157 EAAAAHSSLDVGKSFTIAAILGLQSQRKDYNNAINLSLHDNNNIIGDDNNKCYTSNPNNNNNNNN 221
            .||||.::.....||.|                              ..:|.|   |..:|:.::
  Fly   240 AAAAAAAAAAASSSFAI------------------------------PTSKMY---PYVSNHPSS 271

  Fly   222 NGGSN-----SGNNNSSPS------VNNFNCDSVAGNGRYLHGGHQHPHPHQAGFA-------AV 268
            :||.:     :|..:.|.|      :|::...||             |....|.||       |.
  Fly   272 HGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSV-------------PASASAQFAQFYQHATAA 323

  Fly   269 AAAVGAAPSALQSLQQLHQQHHAQQQA------------------------TLS------FQREK 303
            |:||.||.:....:..|  .:...|.|                        ||:      |:| .
  Fly   324 ASAVSAASAGAIGVDSL--GNACTQPASGVMPGAGGAGGAGIADLPRYPWMTLTDWMGSPFER-V 385

  Fly   304 LKSDSHKKSALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRR 368
            :..|.:..:....:|.|..:|..|...||.||....|:....|:.:||.|.|||.|:|:||||||
  Fly   386 VCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRR 450

  Fly   369 IKWRK 373
            :|.:|
  Fly   451 MKLKK 455

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG18599	NP_650701.1	Homeodomain	317..373	CDD:459649	25/55 (45%)
abd-A	NP_732176.1	Homeodomain	399..455	CDD:459649	25/55 (45%)
		Abdominal-A	456..478	CDD:403567	114/460 (25%)